TVP23A

 

Full name: trans-golgi network vesicle protein 23 homolog A Alias Symbol: YDR084C
Type: protein-coding gene Cytoband: 16p13.13
Entrez ID: 780776 HGNC ID: HGNC:20398 Ensembl Gene: ENSG00000166676 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TVP23A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TVP23A 780776 1563638_at -0.0655 0.8003
GSE26886 TVP23A 780776 1563638_at 0.0400 0.6759
GSE45670 TVP23A 780776 1563638_at -0.0955 0.0731
GSE53622 TVP23A 780776 55161 0.0659 0.7448
GSE53624 TVP23A 780776 55161 0.0972 0.2812
GSE63941 TVP23A 780776 1563638_at -0.0469 0.7447
GSE77861 TVP23A 780776 1563638_at -0.0095 0.9247
SRP064894 TVP23A 780776 RNAseq -0.4171 0.0142
SRP133303 TVP23A 780776 RNAseq -0.1028 0.4193
SRP159526 TVP23A 780776 RNAseq -0.9126 0.0011
SRP193095 TVP23A 780776 RNAseq -0.0399 0.7738
SRP219564 TVP23A 780776 RNAseq 0.1393 0.7414

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by TVP23A expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of TVP23A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TVP23A 780776 5 4 21
GSE20123 TVP23A 780776 5 3 22
GSE43470 TVP23A 780776 3 3 37
GSE46452 TVP23A 780776 38 1 20
GSE47630 TVP23A 780776 14 6 20
GSE54993 TVP23A 780776 3 5 62
GSE54994 TVP23A 780776 5 9 39
GSE60625 TVP23A 780776 4 0 7
GSE74703 TVP23A 780776 3 2 31
GSE74704 TVP23A 780776 2 1 17
TCGA TVP23A 780776 19 13 64

Total number of gains: 101; Total number of losses: 47; Total Number of normals: 340.  

 

Somatic mutations of TVP23A:

 

Generating mutation plots.

 

Highly correlated genes for TVP23A:

 

Showing all 5 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TVP23ACLTCL10.645957303
TVP23ASPP20.625198303
TVP23ALINC010070.604548303
TVP23ASNORA71B0.54046303
TVP23ACOL26A10.527026403

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