| Full name: collagen type XXVI alpha 1 chain | Alias Symbol: Emu2|EMI6 | ||
| Type: protein-coding gene | Cytoband: 7q22.1 | ||
| Entrez ID: 136227 | HGNC ID: HGNC:18038 | Ensembl Gene: ENSG00000160963 | OMIM ID: 608927 |
Expression of COL26A1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | COL26A1 | 136227 | 233894_x_at | -0.0584 | 0.8018 | |
| GSE26886 | COL26A1 | 136227 | 233894_x_at | 0.3996 | 0.0040 | |
| GSE45670 | COL26A1 | 136227 | 229080_at | 0.1139 | 0.2112 | |
| GSE53622 | COL26A1 | 136227 | 57906 | 0.0554 | 0.6210 | |
| GSE53624 | COL26A1 | 136227 | 57906 | 0.0881 | 0.2639 | |
| GSE63941 | COL26A1 | 136227 | 233894_x_at | 0.4978 | 0.0044 | |
| GSE77861 | COL26A1 | 136227 | 233894_x_at | -0.1273 | 0.3127 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by COL26A1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of COL26A1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | COL26A1 | 136227 | 14 | 0 | 16 | |
| GSE20123 | COL26A1 | 136227 | 14 | 0 | 16 | |
| GSE43470 | COL26A1 | 136227 | 7 | 2 | 34 | |
| GSE46452 | COL26A1 | 136227 | 11 | 1 | 47 | |
| GSE47630 | COL26A1 | 136227 | 7 | 3 | 30 | |
| GSE54993 | COL26A1 | 136227 | 1 | 10 | 59 | |
| GSE54994 | COL26A1 | 136227 | 15 | 3 | 35 | |
| GSE60625 | COL26A1 | 136227 | 0 | 0 | 11 | |
| GSE74703 | COL26A1 | 136227 | 7 | 1 | 28 | |
| GSE74704 | COL26A1 | 136227 | 10 | 0 | 10 | |
| TCGA | COL26A1 | 136227 | 53 | 6 | 37 |
Total number of gains: 139; Total number of losses: 26; Total Number of normals: 323.
Somatic mutations of COL26A1:
Generating mutation plots.
Highly correlated genes for COL26A1:
Showing top 20/318 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| COL26A1 | GRASP | 0.733643 | 3 | 0 | 3 |
| COL26A1 | RBBP8NL | 0.731127 | 3 | 0 | 3 |
| COL26A1 | CRYBA2 | 0.722876 | 3 | 0 | 3 |
| COL26A1 | IL34 | 0.721657 | 4 | 0 | 3 |
| COL26A1 | TP53TG5 | 0.720047 | 3 | 0 | 3 |
| COL26A1 | MIR146A | 0.706544 | 3 | 0 | 3 |
| COL26A1 | RBAKDN | 0.702803 | 4 | 0 | 4 |
| COL26A1 | PRX | 0.697959 | 3 | 0 | 3 |
| COL26A1 | CDH23 | 0.697715 | 4 | 0 | 3 |
| COL26A1 | TTC9B | 0.695799 | 4 | 0 | 3 |
| COL26A1 | KLK15 | 0.694671 | 3 | 0 | 3 |
| COL26A1 | FAM171A2 | 0.689675 | 3 | 0 | 3 |
| COL26A1 | CORO7 | 0.682114 | 3 | 0 | 3 |
| COL26A1 | SEMA6C | 0.680412 | 4 | 0 | 3 |
| COL26A1 | MYL10 | 0.675786 | 3 | 0 | 3 |
| COL26A1 | IL5 | 0.672226 | 4 | 0 | 3 |
| COL26A1 | CELF3 | 0.668514 | 5 | 0 | 4 |
| COL26A1 | HMX1 | 0.666557 | 4 | 0 | 3 |
| COL26A1 | PAX4 | 0.666528 | 4 | 0 | 4 |
| COL26A1 | SEMA6B | 0.665723 | 4 | 0 | 3 |
For details and further investigation, click here
