ZNF20

 

Full name: zinc finger protein 20 Alias Symbol: KOX13
Type: protein-coding gene Cytoband: 19p13.2
Entrez ID: 7568 HGNC ID: HGNC:12992 Ensembl Gene: ENSG00000132010 OMIM ID: 194557

 

Expression of ZNF20:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 ZNF20 7568 92753 0.2421 0.0082
GSE53624 ZNF20 7568 92753 0.2484 0.0020
GSE97050 ZNF20 7568 A_33_P3385983 -0.3423 0.2233
SRP007169 ZNF20 7568 RNAseq -0.8448 0.0558
SRP008496 ZNF20 7568 RNAseq -0.5913 0.1472
SRP064894 ZNF20 7568 RNAseq -0.2119 0.5970
SRP133303 ZNF20 7568 RNAseq -0.0299 0.9077
SRP159526 ZNF20 7568 RNAseq -0.1948 0.6286
SRP193095 ZNF20 7568 RNAseq -0.3665 0.0938
SRP219564 ZNF20 7568 RNAseq -0.9105 0.1759
TCGA ZNF20 7568 RNAseq -0.1582 0.0982

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by ZNF20 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of ZNF20:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF20 7568 4 2 24
GSE20123 ZNF20 7568 3 1 26
GSE43470 ZNF20 7568 2 6 35
GSE46452 ZNF20 7568 47 1 11
GSE47630 ZNF20 7568 4 7 29
GSE54993 ZNF20 7568 16 3 51
GSE54994 ZNF20 7568 6 13 34
GSE60625 ZNF20 7568 9 0 2
GSE74703 ZNF20 7568 2 4 30
GSE74704 ZNF20 7568 0 1 19
TCGA ZNF20 7568 14 14 68

Total number of gains: 107; Total number of losses: 52; Total Number of normals: 329.  

 

Somatic mutations of ZNF20:

 

Generating mutation plots.

 

Highly correlated genes for ZNF20:

 

Showing all 4 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF20TNFRSF10C0.669886303
ZNF20EBF20.663967303
ZNF20LEPROTL10.662345303
ZNF20NANOS30.639797303

For details and further investigation, click here