ZNF880

 

Full name: zinc finger protein 880 Alias Symbol: 
Type: protein-coding gene Cytoband: 19q13.41
Entrez ID: 400713 HGNC ID: HGNC:37249 Ensembl Gene: ENSG00000221923 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF880:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF880 400713 232315_at -1.0307 0.4094
GSE26886 ZNF880 400713 235913_at -0.2135 0.1619
GSE45670 ZNF880 400713 232315_at -0.7165 0.1397
GSE53622 ZNF880 400713 46883 0.0029 0.9808
GSE53624 ZNF880 400713 46883 -0.1075 0.3188
GSE63941 ZNF880 400713 235913_at -1.1470 0.0233
GSE77861 ZNF880 400713 235913_at -0.1751 0.0392
GSE97050 ZNF880 400713 A_24_P323967 -0.1393 0.6126
SRP064894 ZNF880 400713 RNAseq -0.2362 0.4760
SRP133303 ZNF880 400713 RNAseq -0.2087 0.4299
SRP193095 ZNF880 400713 RNAseq -0.4545 0.1329
SRP219564 ZNF880 400713 RNAseq -0.6210 0.4208
TCGA ZNF880 400713 RNAseq -0.7909 0.0076

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by ZNF880 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF880:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF880 400713 3 5 22
GSE20123 ZNF880 400713 3 4 23
GSE43470 ZNF880 400713 3 11 29
GSE46452 ZNF880 400713 45 1 13
GSE47630 ZNF880 400713 9 6 25
GSE54993 ZNF880 400713 17 4 49
GSE54994 ZNF880 400713 4 14 35
GSE60625 ZNF880 400713 9 0 2
GSE74703 ZNF880 400713 3 7 26
GSE74704 ZNF880 400713 3 2 15
TCGA ZNF880 400713 15 20 61

Total number of gains: 114; Total number of losses: 74; Total Number of normals: 300.  


 

Somatic mutations of ZNF880:

 

Generating mutation plots.

 

Highly correlated genes for ZNF880:

 

Showing top 20/363 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF880ZNF6760.892406303
ZNF880ZNF7350.88747303
ZNF880ZNF8160.871215303
ZNF880ZNF6000.843851303
ZNF880ZNF7360.811045403
ZNF880ZNF4330.79338303
ZNF880ZNF7290.778821303
ZNF880ZNF8780.761875303
ZNF880VASN0.758795303
ZNF880ZNF2630.751693303
ZNF880ZNF3470.719323706
ZNF880ARL10.71637303
ZNF880ZNF100.70804504
ZNF880HLF0.702331303
ZNF880ZNF6260.699085505
ZNF880EHD30.69654303
ZNF880ZNF2730.693255303
ZNF880ANXA110.686619303
ZNF880ZNF7010.686495504
ZNF880GPD1L0.68599303

For details and further investigation, click here