GPD1L

 

Full name: glycerol-3-phosphate dehydrogenase 1 like Alias Symbol: KIAA0089
Type: protein-coding gene Cytoband: 3p22.3
Entrez ID: 23171 HGNC ID: HGNC:28956 Ensembl Gene: ENSG00000152642 OMIM ID: 611778
Drug and gene relationship at DGIdb

 

Expression of GPD1L:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GPD1L 23171 212510_at -1.5744 0.0368
GSE20347 GPD1L 23171 212510_at -2.1901 0.0000
GSE23400 GPD1L 23171 212510_at -1.4599 0.0000
GSE26886 GPD1L 23171 212510_at -3.7640 0.0000
GSE29001 GPD1L 23171 212510_at -1.9099 0.0000
GSE38129 GPD1L 23171 212510_at -2.1423 0.0000
GSE45670 GPD1L 23171 212510_at -1.6801 0.0001
GSE53622 GPD1L 23171 26832 -2.4339 0.0000
GSE53624 GPD1L 23171 26832 -2.7015 0.0000
GSE63941 GPD1L 23171 212510_at -0.1737 0.7936
GSE77861 GPD1L 23171 212510_at -2.2357 0.0006
GSE97050 GPD1L 23171 A_23_P318284 -1.2147 0.0680
SRP007169 GPD1L 23171 RNAseq -1.6442 0.0004
SRP008496 GPD1L 23171 RNAseq -1.6382 0.0000
SRP064894 GPD1L 23171 RNAseq -2.2691 0.0000
SRP133303 GPD1L 23171 RNAseq -2.1304 0.0000
SRP159526 GPD1L 23171 RNAseq -2.3999 0.0000
SRP193095 GPD1L 23171 RNAseq -2.2474 0.0000
SRP219564 GPD1L 23171 RNAseq -1.6421 0.0007
TCGA GPD1L 23171 RNAseq -0.6776 0.0000

Upregulated datasets: 0; Downregulated datasets: 17.  


 

Survival by GPD1L expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GPD1L:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GPD1L 23171 0 18 12
GSE20123 GPD1L 23171 0 18 12
GSE43470 GPD1L 23171 1 20 22
GSE46452 GPD1L 23171 2 17 40
GSE47630 GPD1L 23171 1 25 14
GSE54993 GPD1L 23171 6 3 61
GSE54994 GPD1L 23171 1 32 20
GSE60625 GPD1L 23171 5 0 6
GSE74703 GPD1L 23171 1 17 18
GSE74704 GPD1L 23171 0 12 8
TCGA GPD1L 23171 1 69 26

Total number of gains: 18; Total number of losses: 231; Total Number of normals: 239.  


 

Somatic mutations of GPD1L:

 

Generating mutation plots.

 

Highly correlated genes for GPD1L:

 

Showing top 20/2195 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GPD1LMPP70.873113707
GPD1LKAT2B0.86407711011
GPD1LUBL30.85173210010
GPD1LMPC10.84896610010
GPD1LCTTNBP20.845945606
GPD1LC5orf66-AS10.843215606
GPD1LRMND5B0.8411311011
GPD1LACOX30.84069610010
GPD1LCAB39L0.83779311011
GPD1LSASH10.83494811011
GPD1LHDHD20.834678505
GPD1LCLEC3B0.833451303
GPD1LPAIP2B0.83297711011
GPD1LFAM214A0.83251606
GPD1LEPHX20.831810010
GPD1LLRRK20.830304707
GPD1LHPGD0.82892812011
GPD1LLMBRD10.82801111011
GPD1LNUCB20.82601511011
GPD1LACAA10.824762808

For details and further investigation, click here