ARMC12

 

Full name: armadillo repeat containing 12 Alias Symbol: FLJ25390
Type: protein-coding gene Cytoband: 6p21.31
Entrez ID: 221481 HGNC ID: HGNC:21099 Ensembl Gene: ENSG00000157343 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ARMC12:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ARMC12 221481 231263_at 0.0272 0.9685
GSE26886 ARMC12 221481 231263_at -0.1515 0.1663
GSE45670 ARMC12 221481 231263_at 0.0696 0.4520
GSE53622 ARMC12 221481 61759 -0.2456 0.0615
GSE53624 ARMC12 221481 61759 0.2252 0.0075
GSE63941 ARMC12 221481 231263_at 0.1166 0.5872
GSE77861 ARMC12 221481 231263_at -0.0699 0.4918
SRP159526 ARMC12 221481 RNAseq 0.1084 0.8844
SRP219564 ARMC12 221481 RNAseq -0.0601 0.9178

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by ARMC12 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of ARMC12:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ARMC12 221481 5 0 25
GSE20123 ARMC12 221481 5 0 25
GSE43470 ARMC12 221481 5 1 37
GSE46452 ARMC12 221481 2 9 48
GSE47630 ARMC12 221481 8 4 28
GSE54993 ARMC12 221481 3 1 66
GSE54994 ARMC12 221481 11 4 38
GSE60625 ARMC12 221481 1 0 10
GSE74703 ARMC12 221481 5 0 31
GSE74704 ARMC12 221481 2 0 18
TCGA ARMC12 221481 15 15 66

Total number of gains: 62; Total number of losses: 34; Total Number of normals: 392.  

 

Somatic mutations of ARMC12:

 

Generating mutation plots.

 

Highly correlated genes for ARMC12:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ARMC12PMVK0.625462303
ARMC12CACFD10.595411303
ARMC12LAIR10.567528403
ARMC12USP30-AS10.558233403
ARMC12THG1L0.539645303
ARMC12SNORA74A0.536347303

For details and further investigation, click here