| Full name: USP30 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 12q24.11 | ||
| Entrez ID: 100131733 | HGNC ID: HGNC:40909 | Ensembl Gene: ENSG00000256262 | OMIM ID: |
Expression of USP30-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | USP30-AS1 | 100131733 | 228675_at | 0.0182 | 0.9599 | |
| GSE26886 | USP30-AS1 | 100131733 | 228675_at | -0.1434 | 0.1907 | |
| GSE45670 | USP30-AS1 | 100131733 | 228675_at | 0.1418 | 0.2945 | |
| GSE53622 | USP30-AS1 | 100131733 | 103311 | 0.1587 | 0.0652 | |
| GSE53624 | USP30-AS1 | 100131733 | 103311 | 0.2518 | 0.0062 | |
| GSE63941 | USP30-AS1 | 100131733 | 228675_at | 0.0574 | 0.7665 | |
| GSE77861 | USP30-AS1 | 100131733 | 228675_at | -0.1633 | 0.1870 | |
| SRP133303 | USP30-AS1 | 100131733 | RNAseq | 0.2414 | 0.4285 | |
| SRP219564 | USP30-AS1 | 100131733 | RNAseq | 1.5332 | 0.0208 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by USP30-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of USP30-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | USP30-AS1 | 100131733 | 5 | 3 | 22 | |
| GSE20123 | USP30-AS1 | 100131733 | 5 | 4 | 21 | |
| GSE43470 | USP30-AS1 | 100131733 | 2 | 1 | 40 | |
| GSE46452 | USP30-AS1 | 100131733 | 9 | 1 | 49 | |
| GSE47630 | USP30-AS1 | 100131733 | 9 | 1 | 30 | |
| GSE54993 | USP30-AS1 | 100131733 | 0 | 5 | 65 | |
| GSE54994 | USP30-AS1 | 100131733 | 3 | 3 | 47 | |
| GSE60625 | USP30-AS1 | 100131733 | 0 | 0 | 11 | |
| GSE74703 | USP30-AS1 | 100131733 | 2 | 0 | 34 | |
| GSE74704 | USP30-AS1 | 100131733 | 2 | 2 | 16 |
Total number of gains: 37; Total number of losses: 20; Total Number of normals: 335.
Somatic mutations of USP30-AS1:
Generating mutation plots.
Highly correlated genes for USP30-AS1:
Showing top 20/76 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| USP30-AS1 | KAAG1 | 0.696173 | 3 | 0 | 3 |
| USP30-AS1 | FFAR2 | 0.677941 | 3 | 0 | 3 |
| USP30-AS1 | GPT | 0.660665 | 3 | 0 | 3 |
| USP30-AS1 | RTP4 | 0.654485 | 3 | 0 | 3 |
| USP30-AS1 | ZBP1 | 0.651018 | 4 | 0 | 4 |
| USP30-AS1 | EPHB2 | 0.641962 | 3 | 0 | 3 |
| USP30-AS1 | ZNF280B | 0.634605 | 3 | 0 | 3 |
| USP30-AS1 | APOL6 | 0.633891 | 3 | 0 | 3 |
| USP30-AS1 | PTP4A3 | 0.619316 | 3 | 0 | 3 |
| USP30-AS1 | TERT | 0.61803 | 3 | 0 | 3 |
| USP30-AS1 | JAKMIP1 | 0.617624 | 4 | 0 | 4 |
| USP30-AS1 | TBC1D10C | 0.61714 | 4 | 0 | 3 |
| USP30-AS1 | ISM1-AS1 | 0.609165 | 3 | 0 | 3 |
| USP30-AS1 | F7 | 0.606235 | 3 | 0 | 3 |
| USP30-AS1 | IRF1 | 0.60447 | 4 | 0 | 3 |
| USP30-AS1 | CD7 | 0.601608 | 5 | 0 | 5 |
| USP30-AS1 | SFMBT2 | 0.599264 | 4 | 0 | 3 |
| USP30-AS1 | PSMB8 | 0.592127 | 3 | 0 | 3 |
| USP30-AS1 | CRP | 0.591384 | 3 | 0 | 3 |
| USP30-AS1 | CPNE7 | 0.590753 | 4 | 0 | 3 |
For details and further investigation, click here
