LINC00698

 

Full name: long intergenic non-protein coding RNA 698 Alias Symbol: 
Type: non-coding RNA Cytoband: 3p14.2
Entrez ID: 285401 HGNC ID: HGNC:27720 Ensembl Gene: ENSG00000244342 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC00698:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00698 285401 1557369_a_at 0.0985 0.6191
GSE26886 LINC00698 285401 1557369_a_at 0.0903 0.4612
GSE45670 LINC00698 285401 1557369_a_at 0.0898 0.3579
GSE53622 LINC00698 285401 10576 0.2215 0.2488
GSE53624 LINC00698 285401 10576 0.0409 0.8357
GSE63941 LINC00698 285401 1557369_a_at -0.1247 0.3705
GSE77861 LINC00698 285401 1557369_a_at -0.0854 0.4648

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00698 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00698:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00698 285401 0 18 12
GSE20123 LINC00698 285401 0 18 12
GSE43470 LINC00698 285401 0 19 24
GSE46452 LINC00698 285401 2 17 40
GSE47630 LINC00698 285401 1 24 15
GSE54993 LINC00698 285401 5 2 63
GSE54994 LINC00698 285401 1 33 19
GSE60625 LINC00698 285401 3 1 7
GSE74703 LINC00698 285401 0 15 21
GSE74704 LINC00698 285401 0 12 8
TCGA LINC00698 285401 0 79 17

Total number of gains: 12; Total number of losses: 238; Total Number of normals: 238.  

 

Somatic mutations of LINC00698:

 

Generating mutation plots.

 

Highly correlated genes for LINC00698:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00698RCE10.676743303
LINC00698GUCA2B0.63088303
LINC00698CST90.609302403
LINC00698MPPE10.591915303
LINC00698UNC5B0.55777303
LINC00698LINC000280.522912303

For details and further investigation, click here