LINC01093

 

Full name: long intergenic non-protein coding RNA 1093 Alias Symbol: 
Type: non-coding RNA Cytoband: 4q35.1
Entrez ID: 100506229 HGNC ID: HGNC:49218 Ensembl Gene: ENSG00000249173 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC01093:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01093 100506229 1559573_at 0.2795 0.6178
GSE26886 LINC01093 100506229 1559573_at -0.2377 0.0141
GSE45670 LINC01093 100506229 1559573_at 0.1297 0.1466
GSE63941 LINC01093 100506229 1559573_at -0.0651 0.6059
GSE77861 LINC01093 100506229 1559573_at -0.0665 0.3981

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Copy number change of LINC01093:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01093 100506229 3 12 15
GSE20123 LINC01093 100506229 3 12 15
GSE43470 LINC01093 100506229 1 12 30
GSE46452 LINC01093 100506229 1 36 22
GSE47630 LINC01093 100506229 0 22 18
GSE54993 LINC01093 100506229 10 0 60
GSE54994 LINC01093 100506229 2 12 39
GSE60625 LINC01093 100506229 0 0 11
GSE74703 LINC01093 100506229 1 9 26
GSE74704 LINC01093 100506229 1 5 14

Total number of gains: 22; Total number of losses: 120; Total Number of normals: 250.  

 

Somatic mutations of LINC01093:

 

Generating mutation plots.

 

Highly correlated genes for LINC01093:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01093LINC012130.625463303
LINC01093SH2D1A0.558861404
LINC01093SLC45A20.553267303
LINC01093GPT0.547676403
LINC01093TTLL20.532436303
LINC01093LAIR10.512017403

For details and further investigation, click here