| Full name: long intergenic non-protein coding RNA 1213 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3q25.1 | ||
| Entrez ID: 101927992 | HGNC ID: HGNC:49648 | Ensembl Gene: ENSG00000244541 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01213:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01213 | 101927992 | 241247_at | -0.0041 | 0.9908 | |
| GSE26886 | LINC01213 | 101927992 | 241247_at | -0.1481 | 0.1918 | |
| GSE45670 | LINC01213 | 101927992 | 241247_at | 0.1128 | 0.4565 | |
| GSE53622 | LINC01213 | 101927992 | 72140 | -0.2755 | 0.2640 | |
| GSE53624 | LINC01213 | 101927992 | 72140 | -0.8819 | 0.0000 | |
| GSE63941 | LINC01213 | 101927992 | 241247_at | 0.1499 | 0.6185 | |
| GSE77861 | LINC01213 | 101927992 | 241247_at | -0.1148 | 0.0777 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01213 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01213:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01213 | 101927992 | 22 | 0 | 8 | |
| GSE20123 | LINC01213 | 101927992 | 22 | 0 | 8 | |
| GSE43470 | LINC01213 | 101927992 | 23 | 0 | 20 | |
| GSE46452 | LINC01213 | 101927992 | 18 | 2 | 39 | |
| GSE47630 | LINC01213 | 101927992 | 19 | 3 | 18 | |
| GSE54993 | LINC01213 | 101927992 | 1 | 10 | 59 | |
| GSE54994 | LINC01213 | 101927992 | 37 | 1 | 15 | |
| GSE60625 | LINC01213 | 101927992 | 0 | 6 | 5 | |
| GSE74703 | LINC01213 | 101927992 | 20 | 0 | 16 | |
| GSE74704 | LINC01213 | 101927992 | 15 | 0 | 5 |
Total number of gains: 177; Total number of losses: 22; Total Number of normals: 193.
Somatic mutations of LINC01213:
Generating mutation plots.
Highly correlated genes for LINC01213:
Showing top 20/47 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01213 | GPT2 | 0.670118 | 3 | 0 | 3 |
| LINC01213 | KIAA1614 | 0.637409 | 3 | 0 | 3 |
| LINC01213 | RAD21L1 | 0.637315 | 3 | 0 | 3 |
| LINC01213 | PLD2 | 0.634561 | 3 | 0 | 3 |
| LINC01213 | LINC01093 | 0.625463 | 3 | 0 | 3 |
| LINC01213 | B3GNT6 | 0.623138 | 3 | 0 | 3 |
| LINC01213 | TTYH1 | 0.61305 | 3 | 0 | 3 |
| LINC01213 | TNR | 0.610238 | 3 | 0 | 3 |
| LINC01213 | LINC00205 | 0.601512 | 3 | 0 | 3 |
| LINC01213 | PDYN | 0.597222 | 5 | 0 | 3 |
| LINC01213 | DEFB123 | 0.596664 | 3 | 0 | 3 |
| LINC01213 | LINC01214 | 0.595856 | 4 | 0 | 3 |
| LINC01213 | GHRH | 0.59288 | 3 | 0 | 3 |
| LINC01213 | SMIM6 | 0.590804 | 3 | 0 | 3 |
| LINC01213 | SNX8 | 0.589384 | 3 | 0 | 3 |
| LINC01213 | MYH6 | 0.588419 | 4 | 0 | 3 |
| LINC01213 | LGALS14 | 0.588151 | 3 | 0 | 3 |
| LINC01213 | STX11 | 0.565701 | 3 | 0 | 3 |
| LINC01213 | CISH | 0.565075 | 4 | 0 | 3 |
| LINC01213 | PLIN3 | 0.561467 | 5 | 0 | 4 |
For details and further investigation, click here
