PRRT3-AS1

 

Full name: PRRT3 antisense RNA 1 Alias Symbol: 
Type: non-coding RNA Cytoband: 3p25.3
Entrez ID: 100874032 HGNC ID: HGNC:41151 Ensembl Gene: ENSG00000230082 OMIM ID: 

 

Expression of PRRT3-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PRRT3-AS1 100874032 242888_at 0.4863 0.4581
GSE26886 PRRT3-AS1 100874032 242888_at 0.4025 0.0610
GSE45670 PRRT3-AS1 100874032 242888_at 0.5238 0.0555
GSE63941 PRRT3-AS1 100874032 242888_at -0.1546 0.8285
GSE77861 PRRT3-AS1 100874032 242888_at -0.0954 0.5457
SRP133303 PRRT3-AS1 100874032 RNAseq -0.0496 0.7866
SRP159526 PRRT3-AS1 100874032 RNAseq 0.6314 0.2877
SRP219564 PRRT3-AS1 100874032 RNAseq -0.8556 0.1072

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Copy number change of PRRT3-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PRRT3-AS1 100874032 1 18 11
GSE20123 PRRT3-AS1 100874032 1 18 11
GSE43470 PRRT3-AS1 100874032 1 20 22
GSE46452 PRRT3-AS1 100874032 2 17 40
GSE47630 PRRT3-AS1 100874032 2 23 15
GSE54993 PRRT3-AS1 100874032 6 1 63
GSE54994 PRRT3-AS1 100874032 3 31 19
GSE60625 PRRT3-AS1 100874032 5 0 6
GSE74703 PRRT3-AS1 100874032 1 16 19
GSE74704 PRRT3-AS1 100874032 1 11 8

Total number of gains: 23; Total number of losses: 155; Total Number of normals: 214.  

 

Somatic mutations of PRRT3-AS1:

 

Generating mutation plots.

 

Highly correlated genes for PRRT3-AS1:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PRRT3-AS1ELAVL20.670927303
PRRT3-AS1FASN0.601506303
PRRT3-AS1POP50.579092303
PRRT3-AS1MRPL550.570298303
PRRT3-AS1C12orf450.55469303
PRRT3-AS1PUS10.548535303

For details and further investigation, click here