RPS20

 

Full name: ribosomal protein S20 Alias Symbol: S20|uS10
Type: protein-coding gene Cytoband: 8q12.1
Entrez ID: 6224 HGNC ID: HGNC:10405 Ensembl Gene: ENSG00000008988 OMIM ID: 603682
Drug and gene relationship at DGIdb

 

Expression of RPS20:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 RPS20 6224 80383 0.1568 0.0435
GSE53624 RPS20 6224 80383 0.3249 0.0000
GSE97050 RPS20 6224 A_23_P168898 -0.0708 0.8494
SRP007169 RPS20 6224 RNAseq -0.7244 0.0543
SRP008496 RPS20 6224 RNAseq -0.7071 0.0015
SRP064894 RPS20 6224 RNAseq 0.3353 0.3772
SRP133303 RPS20 6224 RNAseq -0.1877 0.0762
SRP159526 RPS20 6224 RNAseq -0.2457 0.2911
SRP193095 RPS20 6224 RNAseq -0.4570 0.0025
SRP219564 RPS20 6224 RNAseq 0.2128 0.6212
TCGA RPS20 6224 RNAseq 0.0567 0.2286

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by RPS20 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of RPS20:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RPS20 6224 14 1 15
GSE20123 RPS20 6224 14 1 15
GSE43470 RPS20 6224 13 3 27
GSE46452 RPS20 6224 20 3 36
GSE47630 RPS20 6224 23 1 16
GSE54993 RPS20 6224 1 17 52
GSE54994 RPS20 6224 28 0 25
GSE60625 RPS20 6224 0 4 7
GSE74703 RPS20 6224 12 2 22
GSE74704 RPS20 6224 10 0 10
TCGA RPS20 6224 43 8 45

Total number of gains: 178; Total number of losses: 40; Total Number of normals: 270.  

 

Somatic mutations of RPS20:

 

Generating mutation plots.

 

Highly correlated genes for RPS20:

 

Showing all 11 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RPS20RPL390.635128303
RPS20RPL230.623271404
RPS20RPL35A0.605138404
RPS20RPL190.600101404
RPS20SNHG60.597171303
RPS20RPL120.596562403
RPS20RPS260.549805303
RPS20RPS170.546794403
RPS20RPL380.54435403
RPS20RPL240.51037403
RPS20RPS270.507677403

For details and further investigation, click here