SSSCA1-AS1

 

Full name: SSSCA1 antisense RNA 1 (head to head) Alias Symbol: 
Type: non-coding RNA Cytoband: 11q13.1
Entrez ID: 254100 HGNC ID: HGNC:27384 Ensembl Gene: ENSG00000260233 OMIM ID: 

 

Expression of SSSCA1-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SSSCA1-AS1 254100 1557131_at 0.2080 0.5925
GSE26886 SSSCA1-AS1 254100 1557131_at -0.2778 0.0623
GSE45670 SSSCA1-AS1 254100 1557131_at 0.2456 0.1459
GSE53622 SSSCA1-AS1 254100 33578 0.6438 0.0000
GSE53624 SSSCA1-AS1 254100 33578 0.4033 0.0000
GSE63941 SSSCA1-AS1 254100 1557131_at 0.3680 0.1790
GSE77861 SSSCA1-AS1 254100 1557131_at -0.1876 0.1214

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by SSSCA1-AS1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of SSSCA1-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SSSCA1-AS1 254100 8 5 17
GSE20123 SSSCA1-AS1 254100 8 5 17
GSE43470 SSSCA1-AS1 254100 4 1 38
GSE46452 SSSCA1-AS1 254100 11 3 45
GSE47630 SSSCA1-AS1 254100 7 5 28
GSE54993 SSSCA1-AS1 254100 3 0 67
GSE54994 SSSCA1-AS1 254100 7 5 41
GSE60625 SSSCA1-AS1 254100 0 3 8
GSE74703 SSSCA1-AS1 254100 3 0 33
GSE74704 SSSCA1-AS1 254100 6 3 11

Total number of gains: 57; Total number of losses: 30; Total Number of normals: 305.  

 

Somatic mutations of SSSCA1-AS1:

 

Generating mutation plots.

 

Highly correlated genes for SSSCA1-AS1:

 

Showing all 5 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SSSCA1-AS1POU3F10.642014303
SSSCA1-AS1ZNF5560.630301303
SSSCA1-AS1CAPN100.605068303
SSSCA1-AS1CHRNA90.568831303
SSSCA1-AS1OGFR0.519906403

For details and further investigation, click here