| Full name: zinc finger protein 556 | Alias Symbol: FLJ11637 | ||
| Type: protein-coding gene | Cytoband: 19p13.3 | ||
| Entrez ID: 80032 | HGNC ID: HGNC:25669 | Ensembl Gene: ENSG00000172000 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ZNF556:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZNF556 | 80032 | 220709_at | 0.8925 | 0.2173 | |
| GSE20347 | ZNF556 | 80032 | 220709_at | 0.4667 | 0.0035 | |
| GSE23400 | ZNF556 | 80032 | 220709_at | -0.0525 | 0.1826 | |
| GSE26886 | ZNF556 | 80032 | 220709_at | 0.2643 | 0.3129 | |
| GSE29001 | ZNF556 | 80032 | 220709_at | -0.1749 | 0.4045 | |
| GSE38129 | ZNF556 | 80032 | 220709_at | 0.3951 | 0.0267 | |
| GSE45670 | ZNF556 | 80032 | 220709_at | 0.3366 | 0.1574 | |
| GSE53622 | ZNF556 | 80032 | 3945 | -0.0524 | 0.8125 | |
| GSE53624 | ZNF556 | 80032 | 3945 | -0.0231 | 0.8842 | |
| GSE63941 | ZNF556 | 80032 | 220709_at | 0.5817 | 0.2294 | |
| GSE77861 | ZNF556 | 80032 | 220709_at | -0.2390 | 0.1140 | |
| GSE97050 | ZNF556 | 80032 | A_23_P39454 | 0.0314 | 0.9500 | |
| SRP007169 | ZNF556 | 80032 | RNAseq | 0.4937 | 0.4514 | |
| SRP064894 | ZNF556 | 80032 | RNAseq | -0.3182 | 0.2483 | |
| SRP133303 | ZNF556 | 80032 | RNAseq | -0.1743 | 0.3712 | |
| SRP159526 | ZNF556 | 80032 | RNAseq | 0.2233 | 0.7486 | |
| SRP193095 | ZNF556 | 80032 | RNAseq | -0.3918 | 0.0033 | |
| SRP219564 | ZNF556 | 80032 | RNAseq | 0.2795 | 0.6505 | |
| TCGA | ZNF556 | 80032 | RNAseq | 1.5598 | 0.0005 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by ZNF556 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ZNF556:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZNF556 | 80032 | 4 | 4 | 22 | |
| GSE20123 | ZNF556 | 80032 | 3 | 4 | 23 | |
| GSE43470 | ZNF556 | 80032 | 1 | 9 | 33 | |
| GSE46452 | ZNF556 | 80032 | 47 | 1 | 11 | |
| GSE47630 | ZNF556 | 80032 | 5 | 7 | 28 | |
| GSE54993 | ZNF556 | 80032 | 16 | 3 | 51 | |
| GSE54994 | ZNF556 | 80032 | 8 | 16 | 29 | |
| GSE60625 | ZNF556 | 80032 | 9 | 0 | 2 | |
| GSE74703 | ZNF556 | 80032 | 1 | 6 | 29 | |
| GSE74704 | ZNF556 | 80032 | 1 | 3 | 16 | |
| TCGA | ZNF556 | 80032 | 7 | 23 | 66 |
Total number of gains: 102; Total number of losses: 76; Total Number of normals: 310.
Somatic mutations of ZNF556:
Generating mutation plots.
Highly correlated genes for ZNF556:
Showing top 20/46 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZNF556 | GCNT7 | 0.652802 | 3 | 0 | 3 |
| ZNF556 | LRP8 | 0.647561 | 3 | 0 | 3 |
| ZNF556 | ERVMER34-1 | 0.646009 | 3 | 0 | 3 |
| ZNF556 | KCNG1 | 0.630422 | 3 | 0 | 3 |
| ZNF556 | SSSCA1-AS1 | 0.630301 | 3 | 0 | 3 |
| ZNF556 | DCAF15 | 0.614032 | 4 | 0 | 3 |
| ZNF556 | RPP40 | 0.610141 | 3 | 0 | 3 |
| ZNF556 | TFCP2L1 | 0.593899 | 3 | 0 | 3 |
| ZNF556 | DERL1 | 0.591131 | 3 | 0 | 3 |
| ZNF556 | SDR42E1 | 0.588859 | 4 | 0 | 3 |
| ZNF556 | FBXL6 | 0.588645 | 4 | 0 | 3 |
| ZNF556 | PAX5 | 0.588351 | 3 | 0 | 3 |
| ZNF556 | PA2G4 | 0.587422 | 6 | 0 | 4 |
| ZNF556 | ATP2A2 | 0.587223 | 4 | 0 | 3 |
| ZNF556 | TBX6 | 0.587179 | 4 | 0 | 3 |
| ZNF556 | XRCC3 | 0.581581 | 4 | 0 | 3 |
| ZNF556 | SLC38A7 | 0.574134 | 4 | 0 | 3 |
| ZNF556 | TROAP | 0.56201 | 4 | 0 | 3 |
| ZNF556 | UNG | 0.556741 | 4 | 0 | 3 |
| ZNF556 | KRT5 | 0.556466 | 5 | 0 | 3 |
For details and further investigation, click here
