C14orf39

 

Full name: chromosome 14 open reading frame 39 Alias Symbol: SIX6OS1
Type: protein-coding gene Cytoband: 14q23.1
Entrez ID: 317761 HGNC ID: HGNC:19849 Ensembl Gene: ENSG00000179008 OMIM ID: 617307
Drug and gene relationship at DGIdb

 

Expression of C14orf39:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C14orf39 317761 1561985_at 0.6619 0.4157
GSE26886 C14orf39 317761 1561985_at 0.0309 0.7689
GSE45670 C14orf39 317761 1561985_at 0.0895 0.4936
GSE53622 C14orf39 317761 145626 -0.1131 0.0859
GSE53624 C14orf39 317761 145626 0.1049 0.2065
GSE63941 C14orf39 317761 1561985_at -0.1047 0.3722
GSE77861 C14orf39 317761 1561985_at 0.2402 0.4571
TCGA C14orf39 317761 RNAseq 0.8301 0.4148

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by C14orf39 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of C14orf39:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C14orf39 317761 8 3 19
GSE20123 C14orf39 317761 7 3 20
GSE43470 C14orf39 317761 8 2 33
GSE46452 C14orf39 317761 16 3 40
GSE47630 C14orf39 317761 11 9 20
GSE54993 C14orf39 317761 3 9 58
GSE54994 C14orf39 317761 19 4 30
GSE60625 C14orf39 317761 0 2 9
GSE74703 C14orf39 317761 7 2 27
GSE74704 C14orf39 317761 3 2 15
TCGA C14orf39 317761 32 14 50

Total number of gains: 114; Total number of losses: 53; Total Number of normals: 321.  

 

Somatic mutations of C14orf39:

 

Generating mutation plots.

 

Highly correlated genes for C14orf39:

 

Showing all 7 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C14orf39CCK0.665099303
C14orf39PRR220.646471303
C14orf39LRRC410.604831303
C14orf39ALG100.602497303
C14orf39SEC16A0.595247303
C14orf39NKX2-20.593604303
C14orf39FAM81B0.592184404

For details and further investigation, click here