CTCFL

 

Full name: CCCTC-binding factor like Alias Symbol: dJ579F20.2|BORIS|CT27
Type: protein-coding gene Cytoband: 20q13.31
Entrez ID: 140690 HGNC ID: HGNC:16234 Ensembl Gene: ENSG00000124092 OMIM ID: 607022
Drug and gene relationship at DGIdb

 

Expression of CTCFL:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CTCFL 140690 1552368_at 0.1494 0.7014
GSE26886 CTCFL 140690 1552368_at -0.0588 0.6023
GSE45670 CTCFL 140690 1552368_at 0.3092 0.5214
GSE53622 CTCFL 140690 12555 0.4077 0.0293
GSE53624 CTCFL 140690 12555 0.4792 0.0028
GSE63941 CTCFL 140690 1552368_at 0.2652 0.5808
GSE77861 CTCFL 140690 1552368_at -0.0892 0.3104
SRP064894 CTCFL 140690 RNAseq 0.4181 0.0845
SRP133303 CTCFL 140690 RNAseq 0.3853 0.0687
SRP159526 CTCFL 140690 RNAseq 0.7870 0.1061
SRP193095 CTCFL 140690 RNAseq 0.2461 0.0998
SRP219564 CTCFL 140690 RNAseq 0.5380 0.3187
TCGA CTCFL 140690 RNAseq 1.1501 0.1833

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by CTCFL expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CTCFL:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CTCFL 140690 14 2 14
GSE20123 CTCFL 140690 14 2 14
GSE43470 CTCFL 140690 13 0 30
GSE46452 CTCFL 140690 29 0 30
GSE47630 CTCFL 140690 24 1 15
GSE54993 CTCFL 140690 0 18 52
GSE54994 CTCFL 140690 29 0 24
GSE60625 CTCFL 140690 0 0 11
GSE74703 CTCFL 140690 11 0 25
GSE74704 CTCFL 140690 11 0 9
TCGA CTCFL 140690 43 4 49

Total number of gains: 188; Total number of losses: 27; Total Number of normals: 273.  

 

Somatic mutations of CTCFL:

 

Generating mutation plots.

 

Highly correlated genes for CTCFL:

 

Showing all 6 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CTCFLPASD10.799324303
CTCFLLOR0.789502303
CTCFLCMTM10.643265303
CTCFLTHEM50.617926303
CTCFLCPLX30.588754303
CTCFLMVD0.544773303

For details and further investigation, click here