| Full name: CKLF like MARVEL transmembrane domain containing 1 | Alias Symbol: CKLFH1a|CKLFH | ||
| Type: protein-coding gene | Cytoband: 16q21 | ||
| Entrez ID: 113540 | HGNC ID: HGNC:19172 | Ensembl Gene: ENSG00000089505 | OMIM ID: 607884 |
| Drug and gene relationship at DGIdb | |||
Expression of CMTM1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CMTM1 | 113540 | 231219_at | 0.4562 | 0.1259 | |
| GSE26886 | CMTM1 | 113540 | 1555738_at | -0.1674 | 0.1239 | |
| GSE45670 | CMTM1 | 113540 | 231219_at | -0.0317 | 0.8615 | |
| GSE53622 | CMTM1 | 113540 | 612 | -1.4981 | 0.0000 | |
| GSE53624 | CMTM1 | 113540 | 612 | -1.4264 | 0.0000 | |
| GSE63941 | CMTM1 | 113540 | 231219_at | 0.4683 | 0.2003 | |
| GSE77861 | CMTM1 | 113540 | 1555738_at | -0.1728 | 0.2407 | |
| GSE97050 | CMTM1 | 113540 | A_23_P106661 | -0.0063 | 0.9873 | |
| SRP133303 | CMTM1 | 113540 | RNAseq | 0.8435 | 0.0008 | |
| SRP159526 | CMTM1 | 113540 | RNAseq | 1.6320 | 0.0092 | |
| SRP193095 | CMTM1 | 113540 | RNAseq | 0.7415 | 0.0000 | |
| SRP219564 | CMTM1 | 113540 | RNAseq | 1.3633 | 0.0304 | |
| TCGA | CMTM1 | 113540 | RNAseq | 0.4230 | 0.0009 |
Upregulated datasets: 2; Downregulated datasets: 2.
Survival by CMTM1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CMTM1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CMTM1 | 113540 | 8 | 2 | 20 | |
| GSE20123 | CMTM1 | 113540 | 8 | 2 | 20 | |
| GSE43470 | CMTM1 | 113540 | 1 | 8 | 34 | |
| GSE46452 | CMTM1 | 113540 | 38 | 1 | 20 | |
| GSE47630 | CMTM1 | 113540 | 10 | 8 | 22 | |
| GSE54993 | CMTM1 | 113540 | 2 | 4 | 64 | |
| GSE54994 | CMTM1 | 113540 | 8 | 10 | 35 | |
| GSE60625 | CMTM1 | 113540 | 4 | 0 | 7 | |
| GSE74703 | CMTM1 | 113540 | 1 | 5 | 30 | |
| GSE74704 | CMTM1 | 113540 | 5 | 1 | 14 | |
| TCGA | CMTM1 | 113540 | 30 | 11 | 55 |
Total number of gains: 115; Total number of losses: 52; Total Number of normals: 321.
Somatic mutations of CMTM1:
Generating mutation plots.
Highly correlated genes for CMTM1:
Showing top 20/145 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CMTM1 | HYAL1 | 0.725843 | 3 | 0 | 3 |
| CMTM1 | PASD1 | 0.717007 | 3 | 0 | 3 |
| CMTM1 | ARFRP1 | 0.689935 | 3 | 0 | 3 |
| CMTM1 | PRAM1 | 0.679196 | 3 | 0 | 3 |
| CMTM1 | UPB1 | 0.66599 | 4 | 0 | 4 |
| CMTM1 | TMPRSS11A | 0.663259 | 3 | 0 | 3 |
| CMTM1 | ACOX3 | 0.660826 | 3 | 0 | 3 |
| CMTM1 | OR5AS1 | 0.656295 | 3 | 0 | 3 |
| CMTM1 | ACOT8 | 0.654649 | 5 | 0 | 4 |
| CMTM1 | PRM1 | 0.6524 | 3 | 0 | 3 |
| CMTM1 | PNLIPRP2 | 0.647102 | 3 | 0 | 3 |
| CMTM1 | CTCFL | 0.643265 | 3 | 0 | 3 |
| CMTM1 | AP1G2 | 0.642928 | 3 | 0 | 3 |
| CMTM1 | TRMT44 | 0.639672 | 3 | 0 | 3 |
| CMTM1 | CLEC4M | 0.635564 | 3 | 0 | 3 |
| CMTM1 | MORN3 | 0.633478 | 3 | 0 | 3 |
| CMTM1 | NCCRP1 | 0.629668 | 3 | 0 | 3 |
| CMTM1 | PDCL2 | 0.628865 | 4 | 0 | 4 |
| CMTM1 | MAGEC2 | 0.625949 | 3 | 0 | 3 |
| CMTM1 | LRRC46 | 0.622537 | 3 | 0 | 3 |
For details and further investigation, click here
