LINC00606

 

Full name: long intergenic non-protein coding RNA 606 Alias Symbol: 
Type: non-coding RNA Cytoband: 3p25.3
Entrez ID: 285370 HGNC ID: HGNC:43931 Ensembl Gene: ENSG00000226567 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC00606:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00606 285370 1556448_a_at 0.1004 0.7000
GSE26886 LINC00606 285370 1556448_a_at 0.0519 0.5339
GSE45670 LINC00606 285370 1556448_a_at 0.0818 0.2378
GSE53622 LINC00606 285370 9569 0.3664 0.0003
GSE53624 LINC00606 285370 51207 0.4135 0.0000
GSE63941 LINC00606 285370 1556448_a_at -0.0140 0.9310
GSE77861 LINC00606 285370 1556448_a_at -0.1123 0.3374

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00606 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00606:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00606 285370 1 18 11
GSE20123 LINC00606 285370 2 18 10
GSE43470 LINC00606 285370 0 21 22
GSE46452 LINC00606 285370 2 17 40
GSE47630 LINC00606 285370 2 23 15
GSE54993 LINC00606 285370 6 1 63
GSE54994 LINC00606 285370 3 31 19
GSE60625 LINC00606 285370 5 0 6
GSE74703 LINC00606 285370 0 17 19
GSE74704 LINC00606 285370 1 10 9
TCGA LINC00606 285370 3 67 26

Total number of gains: 25; Total number of losses: 223; Total Number of normals: 240.  

 

Somatic mutations of LINC00606:

 

Generating mutation plots.

 

Highly correlated genes for LINC00606:

 

Showing all 11 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00606CEP1280.634588303
LINC00606OR8B80.597718303
LINC00606PRM30.596041303
LINC00606FAM181A-AS10.589799303
LINC00606AFP0.579955303
LINC00606DBF4B0.577789303
LINC00606KCP0.565623303
LINC00606RAPGEF30.552267403
LINC00606CLRN1-AS10.52255503
LINC00606NLRP90.5087403
LINC00606LINC012700.505165403

For details and further investigation, click here