| Full name: CLRN1 antisense RNA 1 | Alias Symbol: UCRP | ||
| Type: non-coding RNA | Cytoband: 3q25.1 | ||
| Entrez ID: 116933 | HGNC ID: HGNC:30895 | Ensembl Gene: ENSG00000239265 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CLRN1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLRN1-AS1 | 116933 | 1560432_at | -0.0001 | 0.9995 | |
| GSE26886 | CLRN1-AS1 | 116933 | 1560432_at | 0.0309 | 0.7515 | |
| GSE45670 | CLRN1-AS1 | 116933 | 1560432_at | 0.1086 | 0.2925 | |
| GSE53622 | CLRN1-AS1 | 116933 | 27502 | 0.8585 | 0.0000 | |
| GSE53624 | CLRN1-AS1 | 116933 | 27502 | 0.9306 | 0.0000 | |
| GSE63941 | CLRN1-AS1 | 116933 | 1560432_at | -0.0384 | 0.8180 | |
| GSE77861 | CLRN1-AS1 | 116933 | 1560432_at | -0.1145 | 0.2824 | |
| SRP133303 | CLRN1-AS1 | 116933 | RNAseq | 0.1435 | 0.6052 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CLRN1-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of CLRN1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLRN1-AS1 | 116933 | 21 | 0 | 9 | |
| GSE20123 | CLRN1-AS1 | 116933 | 21 | 0 | 9 | |
| GSE43470 | CLRN1-AS1 | 116933 | 23 | 0 | 20 | |
| GSE46452 | CLRN1-AS1 | 116933 | 18 | 2 | 39 | |
| GSE47630 | CLRN1-AS1 | 116933 | 19 | 3 | 18 | |
| GSE54993 | CLRN1-AS1 | 116933 | 1 | 10 | 59 | |
| GSE54994 | CLRN1-AS1 | 116933 | 37 | 1 | 15 | |
| GSE60625 | CLRN1-AS1 | 116933 | 0 | 6 | 5 | |
| GSE74703 | CLRN1-AS1 | 116933 | 20 | 0 | 16 | |
| GSE74704 | CLRN1-AS1 | 116933 | 14 | 0 | 6 |
Total number of gains: 174; Total number of losses: 22; Total Number of normals: 196.
Somatic mutations of CLRN1-AS1:
Generating mutation plots.
Highly correlated genes for CLRN1-AS1:
Showing top 20/48 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLRN1-AS1 | MEP1A | 0.720779 | 3 | 0 | 3 |
| CLRN1-AS1 | C11orf72 | 0.700823 | 3 | 0 | 3 |
| CLRN1-AS1 | TAS2R8 | 0.683965 | 4 | 0 | 4 |
| CLRN1-AS1 | RBM12B-AS1 | 0.646345 | 3 | 0 | 3 |
| CLRN1-AS1 | LINC00937 | 0.632455 | 4 | 0 | 3 |
| CLRN1-AS1 | TNFRSF10C | 0.62573 | 3 | 0 | 3 |
| CLRN1-AS1 | EPHB2 | 0.620546 | 3 | 0 | 3 |
| CLRN1-AS1 | OR5H1 | 0.609742 | 3 | 0 | 3 |
| CLRN1-AS1 | LMX1B | 0.606973 | 3 | 0 | 3 |
| CLRN1-AS1 | LINC00906 | 0.605246 | 4 | 0 | 3 |
| CLRN1-AS1 | INHBC | 0.592581 | 3 | 0 | 3 |
| CLRN1-AS1 | KIF19 | 0.589513 | 4 | 0 | 3 |
| CLRN1-AS1 | ZNF213-AS1 | 0.583769 | 3 | 0 | 3 |
| CLRN1-AS1 | OR1J4 | 0.566769 | 4 | 0 | 3 |
| CLRN1-AS1 | LRRIQ3 | 0.565472 | 3 | 0 | 3 |
| CLRN1-AS1 | NUTM1 | 0.564171 | 4 | 0 | 3 |
| CLRN1-AS1 | OR2C3 | 0.561969 | 5 | 0 | 4 |
| CLRN1-AS1 | FCGR1A | 0.561844 | 4 | 0 | 3 |
| CLRN1-AS1 | DSPP | 0.56181 | 4 | 0 | 3 |
| CLRN1-AS1 | LINC01136 | 0.559626 | 4 | 0 | 3 |
For details and further investigation, click here
