LINC01146

 

Full name: long intergenic non-protein coding RNA 1146 Alias Symbol: 
Type: non-coding RNA Cytoband: 14q31.3
Entrez ID: 283587 HGNC ID: HGNC:49467 Ensembl Gene: ENSG00000258867 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC01146:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01146 283587 1559363_at 0.1482 0.4284
GSE26886 LINC01146 283587 1559363_at 0.0641 0.4798
GSE45670 LINC01146 283587 1559363_at -0.0239 0.7350
GSE53622 LINC01146 283587 53348 0.2154 0.0470
GSE53624 LINC01146 283587 53348 0.3669 0.0002
GSE63941 LINC01146 283587 1559363_at 0.0066 0.9524
GSE77861 LINC01146 283587 1559363_at 0.0231 0.7676

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC01146 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC01146:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01146 283587 7 4 19
GSE20123 LINC01146 283587 7 4 19
GSE43470 LINC01146 283587 8 3 32
GSE46452 LINC01146 283587 16 3 40
GSE47630 LINC01146 283587 11 8 21
GSE54993 LINC01146 283587 3 8 59
GSE54994 LINC01146 283587 19 4 30
GSE60625 LINC01146 283587 0 2 9
GSE74703 LINC01146 283587 6 3 27
GSE74704 LINC01146 283587 4 4 12

Total number of gains: 81; Total number of losses: 43; Total Number of normals: 268.  

 

Somatic mutations of LINC01146:

 

Generating mutation plots.

 

Highly correlated genes for LINC01146:

 

Showing all 9 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01146ATXN8OS0.619262303
LINC01146ADIRF-AS10.598599303
LINC01146CRYGB0.577607503
LINC01146OR7A170.57335403
LINC01146CHEK20.552237303
LINC01146RFX60.538421303
LINC01146CKLF0.527758403
LINC01146TMEM2070.524981403
LINC01146ADAM300.51739403

For details and further investigation, click here