TVP23C

 

Full name: trans-golgi network vesicle protein 23 homolog C Alias Symbol: MGC8763
Type: protein-coding gene Cytoband: 17p12
Entrez ID: 201158 HGNC ID: HGNC:30453 Ensembl Gene: ENSG00000175106 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of TVP23C:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TVP23C 201158 1552377_s_at 0.0275 0.9358
GSE26886 TVP23C 201158 1552377_s_at -0.0155 0.8885
GSE45670 TVP23C 201158 1552377_s_at 0.1498 0.1820
GSE63941 TVP23C 201158 1552377_s_at 0.1668 0.3865
GSE77861 TVP23C 201158 1552377_s_at -0.0560 0.5051
SRP007169 TVP23C 201158 RNAseq -1.0247 0.0413
SRP008496 TVP23C 201158 RNAseq -0.8313 0.0095
SRP064894 TVP23C 201158 RNAseq 0.7348 0.0070
SRP133303 TVP23C 201158 RNAseq -0.1820 0.3110
SRP193095 TVP23C 201158 RNAseq 0.0935 0.5567
SRP219564 TVP23C 201158 RNAseq -0.1811 0.6141

Upregulated datasets: 0; Downregulated datasets: 1.  

 

Copy number change of TVP23C:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TVP23C 201158 3 4 23
GSE20123 TVP23C 201158 3 5 22
GSE43470 TVP23C 201158 2 4 37
GSE46452 TVP23C 201158 34 1 24
GSE47630 TVP23C 201158 7 1 32
GSE54993 TVP23C 201158 3 3 64
GSE54994 TVP23C 201158 6 5 42
GSE60625 TVP23C 201158 4 0 7
GSE74703 TVP23C 201158 2 2 32
GSE74704 TVP23C 201158 2 2 16
TCGA TVP23C 201158 18 22 56

Total number of gains: 84; Total number of losses: 49; Total Number of normals: 355.  

 

Somatic mutations of TVP23C:

 

Generating mutation plots.

 

Highly correlated genes for TVP23C:

 

Showing all 8 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TVP23CCIB40.583959403
TVP23CMUC130.573444303
TVP23CBTBD160.55674303
TVP23CDCHS20.539718403
TVP23CSCN4A0.524427403
TVP23CMC2R0.517103403
TVP23CDEFB1180.507149403
TVP23CLINC010160.500406403

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