| Full name: long intergenic non-protein coding RNA 1016 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 6p21.31 | ||
| Entrez ID: 100507584 | HGNC ID: HGNC:48991 | Ensembl Gene: ENSG00000249346 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01016:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01016 | 100507584 | 1557276_at | -0.1259 | 0.5325 | |
| GSE26886 | LINC01016 | 100507584 | 1556675_s_at | 0.1716 | 0.1447 | |
| GSE45670 | LINC01016 | 100507584 | 1557276_at | 0.0436 | 0.6992 | |
| GSE53622 | LINC01016 | 100507584 | 73318 | -0.9313 | 0.0000 | |
| GSE53624 | LINC01016 | 100507584 | 73318 | -0.9097 | 0.0000 | |
| GSE63941 | LINC01016 | 100507584 | 1557276_at | 0.5914 | 0.0009 | |
| GSE77861 | LINC01016 | 100507584 | 1557276_at | -0.0807 | 0.6341 | |
| SRP133303 | LINC01016 | 100507584 | RNAseq | 0.2469 | 0.0958 | |
| SRP159526 | LINC01016 | 100507584 | RNAseq | 0.4858 | 0.3743 | |
| SRP193095 | LINC01016 | 100507584 | RNAseq | 0.0572 | 0.6905 | |
| SRP219564 | LINC01016 | 100507584 | RNAseq | -0.1513 | 0.7328 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01016 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01016:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01016 | 100507584 | 5 | 0 | 25 | |
| GSE20123 | LINC01016 | 100507584 | 5 | 0 | 25 | |
| GSE43470 | LINC01016 | 100507584 | 6 | 1 | 36 | |
| GSE46452 | LINC01016 | 100507584 | 2 | 9 | 48 | |
| GSE47630 | LINC01016 | 100507584 | 8 | 4 | 28 | |
| GSE54993 | LINC01016 | 100507584 | 3 | 1 | 66 | |
| GSE54994 | LINC01016 | 100507584 | 11 | 4 | 38 | |
| GSE60625 | LINC01016 | 100507584 | 1 | 0 | 10 | |
| GSE74703 | LINC01016 | 100507584 | 5 | 0 | 31 | |
| GSE74704 | LINC01016 | 100507584 | 2 | 0 | 18 |
Total number of gains: 48; Total number of losses: 19; Total Number of normals: 325.
Somatic mutations of LINC01016:
Generating mutation plots.
Highly correlated genes for LINC01016:
Showing top 20/107 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01016 | TCEAL2 | 0.706474 | 3 | 0 | 3 |
| LINC01016 | MYOM1 | 0.699094 | 3 | 0 | 3 |
| LINC01016 | PNPLA2 | 0.67683 | 3 | 0 | 3 |
| LINC01016 | RYR3 | 0.673856 | 3 | 0 | 3 |
| LINC01016 | KCNMB1 | 0.670615 | 4 | 0 | 4 |
| LINC01016 | CD34 | 0.669182 | 3 | 0 | 3 |
| LINC01016 | HSPB6 | 0.663196 | 4 | 0 | 4 |
| LINC01016 | HMHB1 | 0.662992 | 4 | 0 | 3 |
| LINC01016 | WSCD2 | 0.661594 | 3 | 0 | 3 |
| LINC01016 | DISC1 | 0.657765 | 4 | 0 | 4 |
| LINC01016 | PYGM | 0.648465 | 4 | 0 | 3 |
| LINC01016 | PTCHD1 | 0.648027 | 3 | 0 | 3 |
| LINC01016 | NEUROD6 | 0.646668 | 3 | 0 | 3 |
| LINC01016 | CTNNA3 | 0.641003 | 3 | 0 | 3 |
| LINC01016 | PCP4 | 0.639356 | 4 | 0 | 4 |
| LINC01016 | ANAPC16 | 0.633569 | 4 | 0 | 4 |
| LINC01016 | CAMK2B | 0.630498 | 4 | 0 | 4 |
| LINC01016 | C7 | 0.62932 | 3 | 0 | 3 |
| LINC01016 | ZNF169 | 0.628203 | 4 | 0 | 3 |
| LINC01016 | MYO9A | 0.628027 | 3 | 0 | 3 |
For details and further investigation, click here
