ITGA2B

 

Full name: integrin subunit alpha 2b Alias Symbol: CD41B|CD41|PPP1R93
Type: protein-coding gene Cytoband: 17q21.31
Entrez ID: 3674 HGNC ID: HGNC:6138 Ensembl Gene: ENSG00000005961 OMIM ID: 607759
Drug and gene relationship at DGIdb

 

ITGA2B involved pathways:

KEGG pathway Description View
hsa04015Rap1 signaling pathway
hsa04151PI3K-Akt signaling pathway
hsa04510Focal adhesion
hsa04611Platelet activation
hsa04810Regulation of actin cytoskeleton
hsa05200Pathways in cancer
hsa05222Small cell lung cancer

 

Expression of ITGA2B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ITGA2B 3674 206493_at 0.1199 0.6672
GSE20347 ITGA2B 3674 206493_at 0.1218 0.1992
GSE23400 ITGA2B 3674 206493_at 0.0530 0.2564
GSE26886 ITGA2B 3674 206493_at 0.3219 0.0255
GSE29001 ITGA2B 3674 206493_at 0.3145 0.3102
GSE38129 ITGA2B 3674 206493_at 0.0094 0.9422
GSE45670 ITGA2B 3674 206493_at 0.0926 0.4037
GSE53622 ITGA2B 3674 18969 0.3325 0.0007
GSE53624 ITGA2B 3674 18969 0.1174 0.2201
GSE63941 ITGA2B 3674 206493_at 0.3618 0.0613
GSE77861 ITGA2B 3674 206493_at -0.0757 0.6758
GSE97050 ITGA2B 3674 A_24_P65373 0.2667 0.2581
SRP064894 ITGA2B 3674 RNAseq 1.6335 0.0000
SRP133303 ITGA2B 3674 RNAseq 0.1042 0.7692
SRP219564 ITGA2B 3674 RNAseq 1.9294 0.0040
TCGA ITGA2B 3674 RNAseq 1.7507 0.0001

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by ITGA2B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ITGA2B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ITGA2B 3674 5 2 23
GSE20123 ITGA2B 3674 5 2 23
GSE43470 ITGA2B 3674 1 2 40
GSE46452 ITGA2B 3674 32 0 27
GSE47630 ITGA2B 3674 9 0 31
GSE54993 ITGA2B 3674 3 4 63
GSE54994 ITGA2B 3674 8 5 40
GSE60625 ITGA2B 3674 4 0 7
GSE74703 ITGA2B 3674 1 1 34
GSE74704 ITGA2B 3674 3 1 16
TCGA ITGA2B 3674 24 7 65

Total number of gains: 95; Total number of losses: 24; Total Number of normals: 369.  


 

Somatic mutations of ITGA2B:

 

Generating mutation plots.

 

Highly correlated genes for ITGA2B:

 

Showing top 20/401 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ITGA2BWDR830.890847303
ITGA2BC7orf610.833367303
ITGA2BZNF1820.82039303
ITGA2BC19orf250.792563303
ITGA2BING50.780695303
ITGA2BSLC22A160.776735303
ITGA2BCHD50.769753404
ITGA2BGAS6-AS10.768121303
ITGA2BOR1J40.7677303
ITGA2BSLC22A310.76538303
ITGA2BFAM24B0.764431303
ITGA2BHRK0.760985303
ITGA2BATP7B0.759951303
ITGA2BBTBD190.75799303
ITGA2BBSND0.757323303
ITGA2BZNF3290.755003303
ITGA2BKCP0.74935303
ITGA2BRTN4RL10.743682303
ITGA2BNKAIN40.741074303
ITGA2BTSPAN100.740809303

For details and further investigation, click here