TSPAN10

 

Full name: tetraspanin 10 Alias Symbol: OCSP
Type: protein-coding gene Cytoband: 17q25.3
Entrez ID: 83882 HGNC ID: HGNC:29942 Ensembl Gene: ENSG00000182612 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TSPAN10:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TSPAN10 83882 223795_at 0.4791 0.3607
GSE26886 TSPAN10 83882 223795_at 0.4515 0.0554
GSE45670 TSPAN10 83882 223795_at 0.5347 0.0104
GSE53622 TSPAN10 83882 20281 0.1110 0.3200
GSE53624 TSPAN10 83882 20281 -0.0436 0.6720
GSE63941 TSPAN10 83882 223795_at -0.4864 0.1779
GSE77861 TSPAN10 83882 223795_at 0.1506 0.5639
GSE97050 TSPAN10 83882 A_24_P213643 -0.0967 0.6727
SRP133303 TSPAN10 83882 RNAseq 1.4445 0.0003
SRP159526 TSPAN10 83882 RNAseq 0.4364 0.4407
SRP219564 TSPAN10 83882 RNAseq 2.3824 0.0051
TCGA TSPAN10 83882 RNAseq 1.7629 0.0000

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by TSPAN10 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TSPAN10:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TSPAN10 83882 4 4 22
GSE20123 TSPAN10 83882 4 4 22
GSE43470 TSPAN10 83882 3 5 35
GSE46452 TSPAN10 83882 34 0 25
GSE47630 TSPAN10 83882 9 2 29
GSE54993 TSPAN10 83882 2 5 63
GSE54994 TSPAN10 83882 10 6 37
GSE60625 TSPAN10 83882 6 0 5
GSE74703 TSPAN10 83882 3 3 30
GSE74704 TSPAN10 83882 4 3 13
TCGA TSPAN10 83882 25 12 59

Total number of gains: 104; Total number of losses: 44; Total Number of normals: 340.  


 

Somatic mutations of TSPAN10:

 

Generating mutation plots.

 

Highly correlated genes for TSPAN10:

 

Showing top 20/290 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TSPAN10SPATA2L0.825037303
TSPAN10ZNF3290.810057303
TSPAN10KIRREL20.804414303
TSPAN10STRC0.796255303
TSPAN10DCDC10.787385303
TSPAN10GRK40.786274303
TSPAN10OR3A30.778775303
TSPAN10EDA0.77715505
TSPAN10NKX6-30.775334303
TSPAN10GRIK40.772168303
TSPAN10ZIC10.764268303
TSPAN10LHX90.760023303
TSPAN10AGRP0.758829404
TSPAN10HCRT0.757607303
TSPAN10PROC0.750128404
TSPAN10CDH220.747969404
TSPAN10OR2H10.747396303
TSPAN10PABPN1L0.746848303
TSPAN10S1PR40.7424303
TSPAN10ITGA2B0.740809303

For details and further investigation, click here