LINC00525

 

Full name: long intergenic non-protein coding RNA 525 Alias Symbol: 
Type: non-coding RNA Cytoband: 7p12.3
Entrez ID: 84847 HGNC ID: HGNC:40290 Ensembl Gene: ENSG00000146666 OMIM ID: 

 

Expression of LINC00525:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00525 84847 1553708_at 0.2436 0.3321
GSE26886 LINC00525 84847 1553708_at 0.7944 0.1175
GSE45670 LINC00525 84847 1553708_at 0.4696 0.0296
GSE53622 LINC00525 84847 26481 0.3770 0.0000
GSE53624 LINC00525 84847 26481 0.5818 0.0000
GSE63941 LINC00525 84847 1553708_at 0.9798 0.3406
GSE77861 LINC00525 84847 1553708_at -0.1037 0.2300

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00525 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00525:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00525 84847 13 0 17
GSE20123 LINC00525 84847 12 0 18
GSE43470 LINC00525 84847 4 0 39
GSE46452 LINC00525 84847 11 1 47
GSE47630 LINC00525 84847 8 1 31
GSE54993 LINC00525 84847 0 8 62
GSE54994 LINC00525 84847 15 3 35
GSE60625 LINC00525 84847 0 0 11
GSE74703 LINC00525 84847 4 0 32
GSE74704 LINC00525 84847 6 0 14
TCGA LINC00525 84847 51 8 37

Total number of gains: 124; Total number of losses: 21; Total Number of normals: 343.  

 

Somatic mutations of LINC00525:

 

Generating mutation plots.

 

Highly correlated genes for LINC00525:

 

Showing all 8 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00525NLRP110.661328303
LINC00525BEND60.613669303
LINC00525CYP4Z10.579009403
LINC00525MAMSTR0.568499403
LINC00525CPXM10.565831403
LINC00525SND1-IT10.563381403
LINC00525IFIT20.550341303
LINC00525TRIM460.53746403

For details and further investigation, click here