LINC00644

 

Full name: long intergenic non-protein coding RNA 644 Alias Symbol: 
Type: non-coding RNA Cytoband: 14q23.2
Entrez ID: 101954204 HGNC ID: HGNC:44297 Ensembl Gene: ENSG00000259142 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC00644:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00644 101954204 237540_at -0.1081 0.6401
GSE26886 LINC00644 101954204 237540_at -0.0679 0.3893
GSE45670 LINC00644 101954204 237540_at 0.0057 0.9424
GSE63941 LINC00644 101954204 237540_at 0.0513 0.6604
GSE77861 LINC00644 101954204 237540_at -0.1496 0.1665

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Copy number change of LINC00644:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00644 101954204 7 3 20
GSE20123 LINC00644 101954204 7 3 20
GSE43470 LINC00644 101954204 8 2 33
GSE46452 LINC00644 101954204 16 3 40
GSE47630 LINC00644 101954204 11 9 20
GSE54993 LINC00644 101954204 3 9 58
GSE54994 LINC00644 101954204 19 4 30
GSE60625 LINC00644 101954204 0 2 9
GSE74703 LINC00644 101954204 7 2 27
GSE74704 LINC00644 101954204 3 2 15
TCGA LINC00644 101954204 33 14 49

Total number of gains: 114; Total number of losses: 53; Total Number of normals: 321.  

 

Somatic mutations of LINC00644:

 

Generating mutation plots.

 

Highly correlated genes for LINC00644:

 

Showing all 10 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00644IQCJ-SCHIP1-AS10.635325303
LINC00644AMER30.634781303
LINC00644NRAP0.602399303
LINC00644CCER10.601732303
LINC00644KCNJ130.595717303
LINC00644TXNDC20.590581303
LINC00644AGFG20.56706303
LINC00644PDK20.561726303
LINC00644VASN0.540897303
LINC00644RARG0.53856303

For details and further investigation, click here