| Full name: retinoic acid receptor gamma | Alias Symbol: RARC|NR1B3 | ||
| Type: protein-coding gene | Cytoband: 12q13.13 | ||
| Entrez ID: 5916 | HGNC ID: HGNC:9866 | Ensembl Gene: ENSG00000172819 | OMIM ID: 180190 |
| Drug and gene relationship at DGIdb | |||
Expression of RARG:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RARG | 5916 | 204189_at | -0.3248 | 0.5271 | |
| GSE20347 | RARG | 5916 | 204189_at | -0.6973 | 0.0000 | |
| GSE23400 | RARG | 5916 | 204189_at | -0.5791 | 0.0000 | |
| GSE26886 | RARG | 5916 | 204189_at | -0.8247 | 0.0000 | |
| GSE29001 | RARG | 5916 | 204189_at | -0.7524 | 0.0064 | |
| GSE38129 | RARG | 5916 | 204189_at | -0.5805 | 0.0000 | |
| GSE45670 | RARG | 5916 | 204189_at | -0.0218 | 0.8949 | |
| GSE53622 | RARG | 5916 | 91821 | -0.9316 | 0.0000 | |
| GSE53624 | RARG | 5916 | 91821 | -1.0761 | 0.0000 | |
| GSE63941 | RARG | 5916 | 204188_s_at | 2.2902 | 0.0004 | |
| GSE77861 | RARG | 5916 | 204189_at | -0.4467 | 0.0173 | |
| GSE97050 | RARG | 5916 | A_23_P387552 | -0.6558 | 0.2450 | |
| SRP007169 | RARG | 5916 | RNAseq | -2.4224 | 0.0000 | |
| SRP008496 | RARG | 5916 | RNAseq | -2.3681 | 0.0000 | |
| SRP064894 | RARG | 5916 | RNAseq | -1.4482 | 0.0000 | |
| SRP133303 | RARG | 5916 | RNAseq | -0.9568 | 0.0000 | |
| SRP159526 | RARG | 5916 | RNAseq | -1.3340 | 0.0000 | |
| SRP193095 | RARG | 5916 | RNAseq | -0.9601 | 0.0001 | |
| SRP219564 | RARG | 5916 | RNAseq | -1.6135 | 0.0075 | |
| TCGA | RARG | 5916 | RNAseq | 0.3987 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 6.
Survival by RARG expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RARG:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RARG | 5916 | 8 | 1 | 21 | |
| GSE20123 | RARG | 5916 | 8 | 1 | 21 | |
| GSE43470 | RARG | 5916 | 3 | 0 | 40 | |
| GSE46452 | RARG | 5916 | 7 | 1 | 51 | |
| GSE47630 | RARG | 5916 | 10 | 2 | 28 | |
| GSE54993 | RARG | 5916 | 0 | 5 | 65 | |
| GSE54994 | RARG | 5916 | 4 | 1 | 48 | |
| GSE60625 | RARG | 5916 | 0 | 0 | 11 | |
| GSE74703 | RARG | 5916 | 3 | 0 | 33 | |
| GSE74704 | RARG | 5916 | 5 | 1 | 14 | |
| TCGA | RARG | 5916 | 13 | 11 | 72 |
Total number of gains: 61; Total number of losses: 23; Total Number of normals: 404.
Somatic mutations of RARG:
Generating mutation plots.
Highly correlated genes for RARG:
Showing top 20/1722 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RARG | EVPL | 0.828643 | 12 | 0 | 12 |
| RARG | UPK3B | 0.805256 | 3 | 0 | 3 |
| RARG | S100A16 | 0.799433 | 7 | 0 | 7 |
| RARG | DUOX1 | 0.796953 | 12 | 0 | 12 |
| RARG | MAPK3 | 0.793679 | 11 | 0 | 11 |
| RARG | EPHA1 | 0.779486 | 11 | 0 | 11 |
| RARG | PPL | 0.774582 | 12 | 0 | 12 |
| RARG | NCCRP1 | 0.77226 | 3 | 0 | 3 |
| RARG | NIPAL1 | 0.764753 | 3 | 0 | 3 |
| RARG | TGM1 | 0.763461 | 11 | 0 | 11 |
| RARG | DHRS1 | 0.762538 | 10 | 0 | 10 |
| RARG | GDPD3 | 0.761742 | 11 | 0 | 11 |
| RARG | SLC35C1 | 0.760149 | 10 | 0 | 10 |
| RARG | SH3GL1 | 0.75643 | 11 | 0 | 9 |
| RARG | GRHL3 | 0.754781 | 8 | 0 | 8 |
| RARG | SYTL1 | 0.751836 | 8 | 0 | 8 |
| RARG | TECR | 0.751191 | 12 | 0 | 12 |
| RARG | PADI1 | 0.75085 | 9 | 0 | 9 |
| RARG | CLIC3 | 0.74981 | 9 | 0 | 9 |
| RARG | EPGN | 0.749008 | 3 | 0 | 3 |
For details and further investigation, click here
