SLFNL1-AS1

 

Full name: SLFNL1 antisense RNA 1 Alias Symbol: 
Type: non-coding RNA Cytoband: 1p34.2
Entrez ID: 100507178 HGNC ID: HGNC:44126 Ensembl Gene: ENSG00000281207 OMIM ID: 

 

Expression of SLFNL1-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLFNL1-AS1 100507178 232671_at -0.1067 0.6168
GSE26886 SLFNL1-AS1 100507178 232671_at 0.1145 0.3934
GSE45670 SLFNL1-AS1 100507178 232671_at 0.0252 0.8291
GSE63941 SLFNL1-AS1 100507178 232671_at 0.1611 0.2749
GSE77861 SLFNL1-AS1 100507178 232671_at -0.0705 0.5680
SRP007169 SLFNL1-AS1 100507178 RNAseq 0.9811 0.2312
SRP064894 SLFNL1-AS1 100507178 RNAseq 0.7430 0.0011
SRP133303 SLFNL1-AS1 100507178 RNAseq 0.4617 0.0677
SRP159526 SLFNL1-AS1 100507178 RNAseq 1.3664 0.0265
SRP193095 SLFNL1-AS1 100507178 RNAseq 0.7896 0.0003
SRP219564 SLFNL1-AS1 100507178 RNAseq 0.9831 0.0420

Upregulated datasets: 1; Downregulated datasets: 0.  

 

Copy number change of SLFNL1-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLFNL1-AS1 100507178 3 4 23
GSE20123 SLFNL1-AS1 100507178 2 3 25
GSE43470 SLFNL1-AS1 100507178 7 2 34
GSE46452 SLFNL1-AS1 100507178 3 1 55
GSE47630 SLFNL1-AS1 100507178 9 2 29
GSE54993 SLFNL1-AS1 100507178 0 1 69
GSE54994 SLFNL1-AS1 100507178 13 2 38
GSE60625 SLFNL1-AS1 100507178 0 0 11
GSE74703 SLFNL1-AS1 100507178 6 1 29
GSE74704 SLFNL1-AS1 100507178 1 0 19

Total number of gains: 44; Total number of losses: 16; Total Number of normals: 332.  

 

Somatic mutations of SLFNL1-AS1:

 

Generating mutation plots.

 

Highly correlated genes for SLFNL1-AS1:

 

Showing all 8 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLFNL1-AS1LINC002100.624603303
SLFNL1-AS1IGLON50.581698403
SLFNL1-AS1IGSF10.571203404
SLFNL1-AS1AKR1E20.55981303
SLFNL1-AS1NCKAP5L0.537598303
SLFNL1-AS1TMPRSS60.520567403
SLFNL1-AS1TPPP20.512681303
SLFNL1-AS1GUCA1A0.505191403

For details and further investigation, click here