| Full name: VAC14 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 16q22.1 | ||
| Entrez ID: 100130894 | HGNC ID: HGNC:48605 | Ensembl Gene: ENSG00000214353 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of VAC14-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VAC14-AS1 | 100130894 | 1564158_a_at | -0.1389 | 0.5667 | |
| GSE26886 | VAC14-AS1 | 100130894 | 1564158_a_at | -0.1457 | 0.1358 | |
| GSE45670 | VAC14-AS1 | 100130894 | 1564158_a_at | -0.0400 | 0.7370 | |
| GSE53622 | VAC14-AS1 | 100130894 | 8043 | 0.8182 | 0.0000 | |
| GSE53624 | VAC14-AS1 | 100130894 | 8043 | 0.9199 | 0.0000 | |
| GSE63941 | VAC14-AS1 | 100130894 | 1564158_a_at | -0.0627 | 0.6562 | |
| GSE77861 | VAC14-AS1 | 100130894 | 1564158_a_at | -0.0615 | 0.4754 | |
| SRP133303 | VAC14-AS1 | 100130894 | RNAseq | 0.3251 | 0.0316 | |
| SRP159526 | VAC14-AS1 | 100130894 | RNAseq | -0.3561 | 0.4888 | |
| SRP193095 | VAC14-AS1 | 100130894 | RNAseq | 0.2287 | 0.1403 | |
| SRP219564 | VAC14-AS1 | 100130894 | RNAseq | 0.0457 | 0.9496 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by VAC14-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of VAC14-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | VAC14-AS1 | 100130894 | 5 | 1 | 24 | |
| GSE20123 | VAC14-AS1 | 100130894 | 6 | 1 | 23 | |
| GSE43470 | VAC14-AS1 | 100130894 | 2 | 8 | 33 | |
| GSE46452 | VAC14-AS1 | 100130894 | 38 | 1 | 20 | |
| GSE47630 | VAC14-AS1 | 100130894 | 11 | 8 | 21 | |
| GSE54993 | VAC14-AS1 | 100130894 | 2 | 4 | 64 | |
| GSE54994 | VAC14-AS1 | 100130894 | 8 | 10 | 35 | |
| GSE60625 | VAC14-AS1 | 100130894 | 4 | 0 | 7 | |
| GSE74703 | VAC14-AS1 | 100130894 | 2 | 5 | 29 | |
| GSE74704 | VAC14-AS1 | 100130894 | 3 | 0 | 17 |
Total number of gains: 81; Total number of losses: 38; Total Number of normals: 273.
Somatic mutations of VAC14-AS1:
Generating mutation plots.
Highly correlated genes for VAC14-AS1:
Showing all 9 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VAC14-AS1 | NSMF | 0.600338 | 3 | 0 | 3 |
| VAC14-AS1 | SRRM4 | 0.560393 | 3 | 0 | 3 |
| VAC14-AS1 | LINC01351 | 0.559434 | 3 | 0 | 3 |
| VAC14-AS1 | PLOD2 | 0.557656 | 3 | 0 | 3 |
| VAC14-AS1 | MMP14 | 0.521586 | 3 | 0 | 3 |
| VAC14-AS1 | KCNS2 | 0.519344 | 5 | 0 | 3 |
| VAC14-AS1 | APCS | 0.51781 | 3 | 0 | 3 |
| VAC14-AS1 | SLC24A2 | 0.511581 | 4 | 0 | 3 |
| VAC14-AS1 | DLX2 | 0.510716 | 4 | 0 | 3 |
For details and further investigation, click here
