| Full name: TNF receptor superfamily member 13C | Alias Symbol: BAFFR|CD268 | ||
| Type: protein-coding gene | Cytoband: 22q13.2 | ||
| Entrez ID: 115650 | HGNC ID: HGNC:17755 | Ensembl Gene: ENSG00000159958 | OMIM ID: 606269 |
| Drug and gene relationship at DGIdb | |||
TNFRSF13C involved pathways:
| KEGG pathway | Description | View |
|---|---|---|
| hsa04064 | NF-kappa B signaling pathway | |
| hsa05166 | HTLV-I infection |
Expression of TNFRSF13C:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TNFRSF13C | 115650 | 1552892_at | -0.1239 | 0.7089 | |
| GSE26886 | TNFRSF13C | 115650 | 1552892_at | 0.0137 | 0.9383 | |
| GSE45670 | TNFRSF13C | 115650 | 1552892_at | 0.1115 | 0.3270 | |
| GSE53622 | TNFRSF13C | 115650 | 24158 | -0.4497 | 0.0010 | |
| GSE53624 | TNFRSF13C | 115650 | 24158 | -0.3333 | 0.0013 | |
| GSE63941 | TNFRSF13C | 115650 | 1552892_at | 0.2764 | 0.0893 | |
| GSE77861 | TNFRSF13C | 115650 | 1552892_at | -0.1792 | 0.1161 | |
| GSE97050 | TNFRSF13C | 115650 | A_23_P91764 | 0.2327 | 0.4545 | |
| SRP133303 | TNFRSF13C | 115650 | RNAseq | -0.6771 | 0.1927 | |
| SRP159526 | TNFRSF13C | 115650 | RNAseq | -0.8194 | 0.2594 | |
| TCGA | TNFRSF13C | 115650 | RNAseq | 0.2780 | 0.4210 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TNFRSF13C expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TNFRSF13C:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TNFRSF13C | 115650 | 6 | 5 | 19 | |
| GSE20123 | TNFRSF13C | 115650 | 6 | 4 | 20 | |
| GSE43470 | TNFRSF13C | 115650 | 5 | 6 | 32 | |
| GSE46452 | TNFRSF13C | 115650 | 31 | 2 | 26 | |
| GSE47630 | TNFRSF13C | 115650 | 9 | 4 | 27 | |
| GSE54993 | TNFRSF13C | 115650 | 3 | 6 | 61 | |
| GSE54994 | TNFRSF13C | 115650 | 11 | 8 | 34 | |
| GSE60625 | TNFRSF13C | 115650 | 5 | 0 | 6 | |
| GSE74703 | TNFRSF13C | 115650 | 5 | 4 | 27 | |
| GSE74704 | TNFRSF13C | 115650 | 3 | 2 | 15 | |
| TCGA | TNFRSF13C | 115650 | 27 | 14 | 55 |
Total number of gains: 111; Total number of losses: 55; Total Number of normals: 322.
Somatic mutations of TNFRSF13C:
Generating mutation plots.
Highly correlated genes for TNFRSF13C:
Showing top 20/185 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TNFRSF13C | TMPRSS6 | 0.713673 | 4 | 0 | 4 |
| TNFRSF13C | DEFB118 | 0.690075 | 4 | 0 | 4 |
| TNFRSF13C | FBXL18 | 0.687616 | 4 | 0 | 4 |
| TNFRSF13C | PRAMEF11 | 0.659035 | 3 | 0 | 3 |
| TNFRSF13C | TMEM190 | 0.653608 | 3 | 0 | 3 |
| TNFRSF13C | MIR4755 | 0.647996 | 4 | 0 | 3 |
| TNFRSF13C | PRB1 | 0.645104 | 4 | 0 | 3 |
| TNFRSF13C | CAMK2B | 0.641253 | 4 | 0 | 3 |
| TNFRSF13C | SLC24A2 | 0.640742 | 4 | 0 | 3 |
| TNFRSF13C | CALCA | 0.634578 | 3 | 0 | 3 |
| TNFRSF13C | ANHX | 0.63396 | 4 | 0 | 3 |
| TNFRSF13C | CCDC60 | 0.632232 | 4 | 0 | 3 |
| TNFRSF13C | ASCL1 | 0.631796 | 4 | 0 | 3 |
| TNFRSF13C | SLC6A17 | 0.625886 | 3 | 0 | 3 |
| TNFRSF13C | DRP2 | 0.624085 | 4 | 0 | 4 |
| TNFRSF13C | LMF1 | 0.622669 | 3 | 0 | 3 |
| TNFRSF13C | AK7 | 0.618569 | 3 | 0 | 3 |
| TNFRSF13C | DIO3OS | 0.618291 | 3 | 0 | 3 |
| TNFRSF13C | CACNG4 | 0.618153 | 4 | 0 | 4 |
| TNFRSF13C | HTR4 | 0.61717 | 3 | 0 | 3 |
For details and further investigation, click here
