| Full name: CNTFR antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 9p13.3 | ||
| Entrez ID: 415056 | HGNC ID: HGNC:48712 | Ensembl Gene: ENSG00000237159 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CNTFR-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CNTFR-AS1 | 415056 | 1556771_a_at | -0.0430 | 0.8561 | |
| GSE26886 | CNTFR-AS1 | 415056 | 1556771_a_at | -0.0911 | 0.3848 | |
| GSE45670 | CNTFR-AS1 | 415056 | 1556771_a_at | -0.0118 | 0.9109 | |
| GSE63941 | CNTFR-AS1 | 415056 | 1556771_a_at | 0.0747 | 0.5875 | |
| GSE77861 | CNTFR-AS1 | 415056 | 1561590_a_at | -0.0275 | 0.7683 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of CNTFR-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CNTFR-AS1 | 415056 | 4 | 13 | 13 | |
| GSE20123 | CNTFR-AS1 | 415056 | 4 | 13 | 13 | |
| GSE43470 | CNTFR-AS1 | 415056 | 3 | 10 | 30 | |
| GSE46452 | CNTFR-AS1 | 415056 | 6 | 15 | 38 | |
| GSE47630 | CNTFR-AS1 | 415056 | 1 | 20 | 19 | |
| GSE54993 | CNTFR-AS1 | 415056 | 6 | 0 | 64 | |
| GSE54994 | CNTFR-AS1 | 415056 | 6 | 12 | 35 | |
| GSE60625 | CNTFR-AS1 | 415056 | 0 | 0 | 11 | |
| GSE74703 | CNTFR-AS1 | 415056 | 2 | 7 | 27 | |
| GSE74704 | CNTFR-AS1 | 415056 | 0 | 11 | 9 |
Total number of gains: 32; Total number of losses: 101; Total Number of normals: 259.
Somatic mutations of CNTFR-AS1:
Generating mutation plots.
Highly correlated genes for CNTFR-AS1:
Showing top 20/24 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CNTFR-AS1 | LRRC43 | 0.657967 | 3 | 0 | 3 |
| CNTFR-AS1 | TNP1 | 0.634729 | 3 | 0 | 3 |
| CNTFR-AS1 | KCNQ1 | 0.633201 | 3 | 0 | 3 |
| CNTFR-AS1 | TMEM105 | 0.619983 | 4 | 0 | 3 |
| CNTFR-AS1 | MROH9 | 0.609851 | 3 | 0 | 3 |
| CNTFR-AS1 | TRHR | 0.599963 | 3 | 0 | 3 |
| CNTFR-AS1 | TMEM190 | 0.591529 | 3 | 0 | 3 |
| CNTFR-AS1 | LINC00572 | 0.590523 | 3 | 0 | 3 |
| CNTFR-AS1 | GP9 | 0.587361 | 3 | 0 | 3 |
| CNTFR-AS1 | GCGR | 0.574622 | 3 | 0 | 3 |
| CNTFR-AS1 | INSL3 | 0.563726 | 3 | 0 | 3 |
| CNTFR-AS1 | C12orf40 | 0.562373 | 3 | 0 | 3 |
| CNTFR-AS1 | MAPT-AS1 | 0.561847 | 3 | 0 | 3 |
| CNTFR-AS1 | ALDH1L1-AS2 | 0.558078 | 4 | 0 | 3 |
| CNTFR-AS1 | RHOD | 0.551166 | 3 | 0 | 3 |
| CNTFR-AS1 | NXF5 | 0.550723 | 3 | 0 | 3 |
| CNTFR-AS1 | LINC00470 | 0.549331 | 5 | 0 | 3 |
| CNTFR-AS1 | ZG16 | 0.543922 | 4 | 0 | 3 |
| CNTFR-AS1 | PRSS55 | 0.531968 | 4 | 0 | 3 |
| CNTFR-AS1 | SOX10 | 0.531736 | 4 | 0 | 3 |
For details and further investigation, click here
