LINC00951

 

Full name: long intergenic non-protein coding RNA 951 Alias Symbol: lincRNA-uc003opf.1|FLJ41649
Type: non-coding RNA Cytoband: 6p21.2
Entrez ID: 401260 HGNC ID: HGNC:48662 Ensembl Gene: ENSG00000204092 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC00951:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00951 401260 1562219_at -0.0558 0.8382
GSE26886 LINC00951 401260 1562219_at -0.2540 0.0201
GSE45670 LINC00951 401260 1562219_at 0.0707 0.5714
GSE53622 LINC00951 401260 116880 -0.1938 0.0150
GSE53624 LINC00951 401260 116880 -0.3392 0.0000
GSE63941 LINC00951 401260 1562219_at -0.0346 0.8416
GSE77861 LINC00951 401260 1562219_at -0.0737 0.4313

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00951 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00951:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00951 401260 2 2 26
GSE20123 LINC00951 401260 2 2 26
GSE43470 LINC00951 401260 6 0 37
GSE46452 LINC00951 401260 2 9 48
GSE47630 LINC00951 401260 8 4 28
GSE54993 LINC00951 401260 3 2 65
GSE54994 LINC00951 401260 10 4 39
GSE60625 LINC00951 401260 0 1 10
GSE74703 LINC00951 401260 6 0 30
GSE74704 LINC00951 401260 1 1 18
TCGA LINC00951 401260 19 14 63

Total number of gains: 59; Total number of losses: 39; Total Number of normals: 390.  

 

Somatic mutations of LINC00951:

 

Generating mutation plots.

 

Highly correlated genes for LINC00951:

 

Showing all 11 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00951SLC34A30.612564303
LINC00951SULT1B10.580314303
LINC00951AGXT20.574887303
LINC00951KCNQ40.548344303
LINC00951OR11A10.543343303
LINC00951PCGEM10.542705303
LINC00951PSG60.535059503
LINC00951TCL60.533722504
LINC00951PSG30.529413403
LINC00951PDZD30.51065403
LINC00951C2orf160.506636503

For details and further investigation, click here