C2orf16

 

Full name: chromosome 2 open reading frame 16 Alias Symbol: DKFZp434G118
Type: protein-coding gene Cytoband: 2p23.3
Entrez ID: 84226 HGNC ID: HGNC:25275 Ensembl Gene: ENSG00000221843 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C2orf16:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C2orf16 84226 224000_at -0.3848 0.1641
GSE26886 C2orf16 84226 224000_at -0.5726 0.0003
GSE45670 C2orf16 84226 224000_at -0.1642 0.2341
GSE53622 C2orf16 84226 24978 -0.3495 0.0115
GSE53624 C2orf16 84226 24978 -1.2286 0.0000
GSE63941 C2orf16 84226 224000_at 0.3086 0.0995
GSE77861 C2orf16 84226 224000_at -0.2940 0.0153
GSE97050 C2orf16 84226 A_24_P222890 0.0040 0.9884
SRP064894 C2orf16 84226 RNAseq -0.7219 0.0138
SRP133303 C2orf16 84226 RNAseq -0.2876 0.2702
SRP159526 C2orf16 84226 RNAseq 0.5409 0.3109
SRP193095 C2orf16 84226 RNAseq -0.4107 0.0380
TCGA C2orf16 84226 RNAseq -0.1047 0.5014

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by C2orf16 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C2orf16:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C2orf16 84226 11 2 17
GSE20123 C2orf16 84226 11 2 17
GSE43470 C2orf16 84226 3 1 39
GSE46452 C2orf16 84226 2 4 53
GSE47630 C2orf16 84226 8 0 32
GSE54993 C2orf16 84226 0 6 64
GSE54994 C2orf16 84226 10 0 43
GSE60625 C2orf16 84226 0 3 8
GSE74703 C2orf16 84226 3 0 33
GSE74704 C2orf16 84226 9 1 10
TCGA C2orf16 84226 36 2 58

Total number of gains: 93; Total number of losses: 21; Total Number of normals: 374.  


 

Somatic mutations of C2orf16:

 

Generating mutation plots.

 

Highly correlated genes for C2orf16:

 

Showing top 20/778 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C2orf16ALG90.862308303
C2orf16GNG50.813956303
C2orf16APEH0.791819303
C2orf16XKR60.763275303
C2orf16ADRB30.748574303
C2orf16MYCN0.735963303
C2orf16CLTA0.733313303
C2orf16ACTR3C0.730493303
C2orf16KCNJ50.727356504
C2orf16CACNG60.726873505
C2orf16SREBF20.726386303
C2orf16LRP110.721424303
C2orf16SLAMF70.715746303
C2orf16DENND4C0.712777303
C2orf16FBXO100.712224403
C2orf16SMR3B0.711936404
C2orf16CCDC1540.711027505
C2orf16ELL30.710678404
C2orf16LINC012100.7106403
C2orf16VPS37B0.709947505

For details and further investigation, click here