LINC01187

 

Full name: long intergenic non-protein coding RNA 1187 Alias Symbol: KIDR
Type: non-coding RNA Cytoband: 5q35.1
Entrez ID: 100507267 HGNC ID: HGNC:49575 Ensembl Gene: ENSG00000249601 OMIM ID: 

 

Expression of LINC01187:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01187 100507267 240807_at -0.0579 0.8709
GSE26886 LINC01187 100507267 240807_at 0.0058 0.9716
GSE45670 LINC01187 100507267 240807_at -0.0118 0.9210
GSE53622 LINC01187 100507267 2444 -0.8193 0.0000
GSE53624 LINC01187 100507267 2444 0.0140 0.8976
GSE63941 LINC01187 100507267 240807_at 0.0858 0.5679
GSE77861 LINC01187 100507267 240807_at -0.0703 0.5277

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC01187 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC01187:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01187 100507267 1 13 16
GSE20123 LINC01187 100507267 1 13 16
GSE43470 LINC01187 100507267 1 9 33
GSE46452 LINC01187 100507267 0 27 32
GSE47630 LINC01187 100507267 0 20 20
GSE54993 LINC01187 100507267 9 2 59
GSE54994 LINC01187 100507267 2 15 36
GSE60625 LINC01187 100507267 1 0 10
GSE74703 LINC01187 100507267 1 6 29
GSE74704 LINC01187 100507267 0 6 14

Total number of gains: 16; Total number of losses: 111; Total Number of normals: 265.  

 

Somatic mutations of LINC01187:

 

Generating mutation plots.

 

Highly correlated genes for LINC01187:

 

Showing all 11 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01187ANKRD34C0.61128303
LINC01187SUSD20.573276303
LINC01187CRH0.570073403
LINC01187OTOR0.566306404
LINC01187MYL100.55844403
LINC01187CELF30.547471303
LINC01187RHOF0.543686303
LINC01187LCN120.528588403
LINC01187TBKBP10.526774403
LINC01187LINC003090.51567303
LINC01187KCNQ1DN0.502149403

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