SCP2D1

 

Full name: SCP2 sterol binding domain containing 1 Alias Symbol: dJ1068E13.2|HSD22
Type: protein-coding gene Cytoband: 20p11.23
Entrez ID: 140856 HGNC ID: HGNC:16211 Ensembl Gene: ENSG00000132631 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of SCP2D1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SCP2D1 140856 231134_at 0.0699 0.7927
GSE26886 SCP2D1 140856 231134_at -0.0397 0.7859
GSE45670 SCP2D1 140856 231134_at 0.0661 0.4556
GSE53622 SCP2D1 140856 53717 0.3175 0.0165
GSE53624 SCP2D1 140856 53717 0.1940 0.0440
GSE63941 SCP2D1 140856 231134_at 0.2220 0.1967
GSE77861 SCP2D1 140856 231134_at -0.1173 0.2874

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by SCP2D1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of SCP2D1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SCP2D1 140856 13 2 15
GSE20123 SCP2D1 140856 13 2 15
GSE43470 SCP2D1 140856 11 1 31
GSE46452 SCP2D1 140856 27 1 31
GSE47630 SCP2D1 140856 17 4 19
GSE54993 SCP2D1 140856 0 15 55
GSE54994 SCP2D1 140856 26 2 25
GSE60625 SCP2D1 140856 0 0 11
GSE74703 SCP2D1 140856 8 1 27
GSE74704 SCP2D1 140856 7 2 11
TCGA SCP2D1 140856 44 10 42

Total number of gains: 166; Total number of losses: 40; Total Number of normals: 282.  

 

Somatic mutations of SCP2D1:

 

Generating mutation plots.

 

Highly correlated genes for SCP2D1:

 

Showing all 15 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SCP2D1MCHR10.633801303
SCP2D1LINC003540.60938303
SCP2D1ADAMTS160.606752404
SCP2D1SPACA70.600796303
SCP2D1CLDN20.598448303
SCP2D1OXER10.575705303
SCP2D1SPATA190.563136303
SCP2D1PCBP30.563105303
SCP2D1ATP1B40.562168403
SCP2D1ZBTB20-AS10.560159303
SCP2D1ADAM110.536738403
SCP2D1PSPN0.527723503
SCP2D1TM4SF200.527101404
SCP2D1IGSF210.523016303
SCP2D1SNHG100.514408303

For details and further investigation, click here