| Full name: small nucleolar RNA host gene 10 | Alias Symbol: FLJ40557|NCRNA00063|LINC00063 | ||
| Type: non-coding RNA | Cytoband: 14q32.13 | ||
| Entrez ID: 283596 | HGNC ID: HGNC:27510 | Ensembl Gene: ENSG00000247092 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SNHG10:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNHG10 | 283596 | 229209_at | 0.1383 | 0.5873 | |
| GSE26886 | SNHG10 | 283596 | 229209_at | 0.0971 | 0.5301 | |
| GSE45670 | SNHG10 | 283596 | 229209_at | -0.0230 | 0.8029 | |
| GSE53622 | SNHG10 | 283596 | 30592 | 0.6202 | 0.0000 | |
| GSE53624 | SNHG10 | 283596 | 40124 | 0.5861 | 0.0000 | |
| GSE63941 | SNHG10 | 283596 | 229209_at | 0.2460 | 0.0729 | |
| GSE77861 | SNHG10 | 283596 | 229209_at | -0.1052 | 0.4490 | |
| SRP064894 | SNHG10 | 283596 | RNAseq | 0.3146 | 0.0738 | |
| SRP133303 | SNHG10 | 283596 | RNAseq | 0.5511 | 0.0005 | |
| SRP159526 | SNHG10 | 283596 | RNAseq | 0.7070 | 0.0956 | |
| SRP193095 | SNHG10 | 283596 | RNAseq | 0.8486 | 0.0000 | |
| SRP219564 | SNHG10 | 283596 | RNAseq | 0.5387 | 0.1123 | |
| TCGA | SNHG10 | 283596 | RNAseq | 0.2952 | 0.0058 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNHG10 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNHG10:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNHG10 | 283596 | 10 | 4 | 16 | |
| GSE20123 | SNHG10 | 283596 | 10 | 3 | 17 | |
| GSE43470 | SNHG10 | 283596 | 8 | 3 | 32 | |
| GSE46452 | SNHG10 | 283596 | 16 | 3 | 40 | |
| GSE47630 | SNHG10 | 283596 | 11 | 8 | 21 | |
| GSE54993 | SNHG10 | 283596 | 3 | 8 | 59 | |
| GSE54994 | SNHG10 | 283596 | 21 | 4 | 28 | |
| GSE60625 | SNHG10 | 283596 | 0 | 2 | 9 | |
| GSE74703 | SNHG10 | 283596 | 6 | 3 | 27 | |
| GSE74704 | SNHG10 | 283596 | 6 | 3 | 11 | |
| TCGA | SNHG10 | 283596 | 30 | 19 | 47 |
Total number of gains: 121; Total number of losses: 60; Total Number of normals: 307.
Somatic mutations of SNHG10:
Generating mutation plots.
Highly correlated genes for SNHG10:
Showing top 20/62 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNHG10 | C2CD4B | 0.642243 | 3 | 0 | 3 |
| SNHG10 | PLXNA4 | 0.637034 | 3 | 0 | 3 |
| SNHG10 | FGFR4 | 0.629659 | 3 | 0 | 3 |
| SNHG10 | SNRPG | 0.628217 | 3 | 0 | 3 |
| SNHG10 | ULBP3 | 0.627499 | 3 | 0 | 3 |
| SNHG10 | RAN | 0.626874 | 3 | 0 | 3 |
| SNHG10 | NOL10 | 0.624124 | 4 | 0 | 3 |
| SNHG10 | C3orf33 | 0.59691 | 3 | 0 | 3 |
| SNHG10 | SASS6 | 0.59521 | 4 | 0 | 3 |
| SNHG10 | CRYAA | 0.595161 | 3 | 0 | 3 |
| SNHG10 | NTSR1 | 0.593724 | 4 | 0 | 3 |
| SNHG10 | C21orf58 | 0.592333 | 4 | 0 | 3 |
| SNHG10 | ERCC3 | 0.590737 | 3 | 0 | 3 |
| SNHG10 | WDR90 | 0.581287 | 4 | 0 | 4 |
| SNHG10 | NRG1 | 0.580152 | 4 | 0 | 3 |
| SNHG10 | ARX | 0.576706 | 4 | 0 | 4 |
| SNHG10 | HEYL | 0.574845 | 4 | 0 | 3 |
| SNHG10 | FBXO44 | 0.573887 | 4 | 0 | 3 |
| SNHG10 | MRPL47 | 0.572811 | 4 | 0 | 3 |
| SNHG10 | NYX | 0.569781 | 4 | 0 | 4 |
For details and further investigation, click here
