| Full name: beta-1,4-N-acetyl-galactosaminyltransferase 2 | Alias Symbol: Sda|Cad | ||
| Type: protein-coding gene | Cytoband: 17q21.32 | ||
| Entrez ID: 124872 | HGNC ID: HGNC:24136 | Ensembl Gene: ENSG00000167080 | OMIM ID: 111730 |
| Drug and gene relationship at DGIdb | |||
Expression of B4GALNT2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | B4GALNT2 | 124872 | 1552903_at | -0.0686 | 0.8722 | |
| GSE26886 | B4GALNT2 | 124872 | 1552903_at | -0.0520 | 0.6494 | |
| GSE45670 | B4GALNT2 | 124872 | 1552903_at | 0.3057 | 0.0054 | |
| GSE53622 | B4GALNT2 | 124872 | 21887 | 0.9653 | 0.0086 | |
| GSE53624 | B4GALNT2 | 124872 | 21887 | 0.5843 | 0.0004 | |
| GSE63941 | B4GALNT2 | 124872 | 1552903_at | 0.2974 | 0.5723 | |
| GSE77861 | B4GALNT2 | 124872 | 1552903_at | -0.0155 | 0.8927 | |
| SRP007169 | B4GALNT2 | 124872 | RNAseq | 0.9794 | 0.1268 | |
| SRP008496 | B4GALNT2 | 124872 | RNAseq | 1.0820 | 0.0338 | |
| SRP064894 | B4GALNT2 | 124872 | RNAseq | 0.0803 | 0.7481 | |
| SRP133303 | B4GALNT2 | 124872 | RNAseq | 0.1706 | 0.2031 | |
| SRP159526 | B4GALNT2 | 124872 | RNAseq | 1.3068 | 0.0014 | |
| SRP193095 | B4GALNT2 | 124872 | RNAseq | 0.1887 | 0.0826 | |
| SRP219564 | B4GALNT2 | 124872 | RNAseq | -0.0274 | 0.9443 | |
| TCGA | B4GALNT2 | 124872 | RNAseq | -2.2239 | 0.0120 |
Upregulated datasets: 2; Downregulated datasets: 1.
Survival by B4GALNT2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of B4GALNT2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | B4GALNT2 | 124872 | 6 | 2 | 22 | |
| GSE20123 | B4GALNT2 | 124872 | 6 | 2 | 22 | |
| GSE43470 | B4GALNT2 | 124872 | 3 | 2 | 38 | |
| GSE46452 | B4GALNT2 | 124872 | 32 | 0 | 27 | |
| GSE47630 | B4GALNT2 | 124872 | 9 | 0 | 31 | |
| GSE54993 | B4GALNT2 | 124872 | 2 | 4 | 64 | |
| GSE54994 | B4GALNT2 | 124872 | 10 | 6 | 37 | |
| GSE60625 | B4GALNT2 | 124872 | 4 | 0 | 7 | |
| GSE74703 | B4GALNT2 | 124872 | 3 | 2 | 31 | |
| GSE74704 | B4GALNT2 | 124872 | 4 | 1 | 15 | |
| TCGA | B4GALNT2 | 124872 | 27 | 7 | 62 |
Total number of gains: 106; Total number of losses: 26; Total Number of normals: 356.
Somatic mutations of B4GALNT2:
Generating mutation plots.
Highly correlated genes for B4GALNT2:
Showing all 13 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| B4GALNT2 | CCDC60 | 0.66372 | 3 | 0 | 3 |
| B4GALNT2 | RTP3 | 0.634893 | 3 | 0 | 3 |
| B4GALNT2 | ADCY1 | 0.610041 | 3 | 0 | 3 |
| B4GALNT2 | CNTD2 | 0.600485 | 3 | 0 | 3 |
| B4GALNT2 | JOSD2 | 0.594896 | 3 | 0 | 3 |
| B4GALNT2 | KCNIP2 | 0.59093 | 3 | 0 | 3 |
| B4GALNT2 | IL1RL1 | 0.581978 | 3 | 0 | 3 |
| B4GALNT2 | R3HDM4 | 0.577302 | 3 | 0 | 3 |
| B4GALNT2 | KCNK16 | 0.550863 | 4 | 0 | 3 |
| B4GALNT2 | FAM205A | 0.547315 | 4 | 0 | 3 |
| B4GALNT2 | OR51B2 | 0.540635 | 4 | 0 | 3 |
| B4GALNT2 | PRR32 | 0.534336 | 3 | 0 | 3 |
| B4GALNT2 | TMEM92 | 0.531419 | 4 | 0 | 3 |
For details and further investigation, click here
