KCNIP2

 

Full name: potassium voltage-gated channel interacting protein 2 Alias Symbol: KCHIP2
Type: protein-coding gene Cytoband: 10q24.32
Entrez ID: 30819 HGNC ID: HGNC:15522 Ensembl Gene: ENSG00000120049 OMIM ID: 604661
Drug and gene relationship at DGIdb

 

Expression of KCNIP2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KCNIP2 30819 223727_at -0.0168 0.9646
GSE20347 KCNIP2 30819 221321_s_at 0.0291 0.7178
GSE23400 KCNIP2 30819 221321_s_at -0.0352 0.2050
GSE26886 KCNIP2 30819 223727_at -0.1180 0.3760
GSE29001 KCNIP2 30819 221321_s_at 0.0062 0.9761
GSE38129 KCNIP2 30819 221321_s_at -0.0354 0.6514
GSE45670 KCNIP2 30819 223727_at 0.1347 0.0739
GSE53622 KCNIP2 30819 58754 0.1969 0.0748
GSE53624 KCNIP2 30819 54161 -0.1632 0.1127
GSE63941 KCNIP2 30819 223727_at 0.2813 0.0796
GSE77861 KCNIP2 30819 223727_at -0.0457 0.7152
GSE97050 KCNIP2 30819 A_24_P12998 0.2316 0.3640
SRP133303 KCNIP2 30819 RNAseq -0.3819 0.0775
SRP159526 KCNIP2 30819 RNAseq -0.1067 0.8182
SRP219564 KCNIP2 30819 RNAseq -0.4547 0.3150
TCGA KCNIP2 30819 RNAseq -0.3441 0.1010

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by KCNIP2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KCNIP2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KCNIP2 30819 2 9 19
GSE20123 KCNIP2 30819 2 8 20
GSE43470 KCNIP2 30819 0 8 35
GSE46452 KCNIP2 30819 0 11 48
GSE47630 KCNIP2 30819 2 14 24
GSE54993 KCNIP2 30819 8 0 62
GSE54994 KCNIP2 30819 1 12 40
GSE60625 KCNIP2 30819 0 0 11
GSE74703 KCNIP2 30819 0 5 31
GSE74704 KCNIP2 30819 1 4 15
TCGA KCNIP2 30819 5 29 62

Total number of gains: 21; Total number of losses: 100; Total Number of normals: 367.  


 

Somatic mutations of KCNIP2:

 

Generating mutation plots.

 

Highly correlated genes for KCNIP2:

 

Showing top 20/452 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KCNIP2SERPIND10.775074303
KCNIP2KRTAP5-AS10.682812303
KCNIP2TSSK60.677996303
KCNIP2CD79B0.671021303
KCNIP2INE10.670855404
KCNIP2CRYBA10.668382403
KCNIP2MTAP0.66771404
KCNIP2HCG90.660867303
KCNIP2SNCG0.655155403
KCNIP2DEFA60.653224504
KCNIP2NAT20.642977404
KCNIP2AKAP50.641628303
KCNIP2AMELY0.638849403
KCNIP2TMEM72-AS10.637688404
KCNIP2LIPF0.636822505
KCNIP2SLAMF60.631501303
KCNIP2OR10J10.630248505
KCNIP2GEMIN70.629385504
KCNIP2SLC2A40.626131303
KCNIP2MIR47550.623413303

For details and further investigation, click here