| Full name: receptor transporter protein 3 | Alias Symbol: LTM1|Z3CXXC3 | ||
| Type: protein-coding gene | Cytoband: 3p21.31 | ||
| Entrez ID: 83597 | HGNC ID: HGNC:15572 | Ensembl Gene: ENSG00000163825 | OMIM ID: 607181 |
| Drug and gene relationship at DGIdb | |||
Expression of RTP3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RTP3 | 83597 | 1552568_at | -0.2019 | 0.5661 | |
| GSE26886 | RTP3 | 83597 | 1552568_at | -0.0071 | 0.9729 | |
| GSE45670 | RTP3 | 83597 | 1552568_at | 0.1606 | 0.2793 | |
| GSE53622 | RTP3 | 83597 | 66888 | 0.8614 | 0.0006 | |
| GSE53624 | RTP3 | 83597 | 66888 | 1.0403 | 0.0000 | |
| GSE63941 | RTP3 | 83597 | 1552568_at | 0.3843 | 0.1094 | |
| GSE77861 | RTP3 | 83597 | 1552568_at | -0.1139 | 0.4906 | |
| TCGA | RTP3 | 83597 | RNAseq | 4.0014 | 0.0005 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by RTP3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RTP3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RTP3 | 83597 | 0 | 17 | 13 | |
| GSE20123 | RTP3 | 83597 | 0 | 18 | 12 | |
| GSE43470 | RTP3 | 83597 | 0 | 20 | 23 | |
| GSE46452 | RTP3 | 83597 | 2 | 17 | 40 | |
| GSE47630 | RTP3 | 83597 | 2 | 23 | 15 | |
| GSE54993 | RTP3 | 83597 | 7 | 2 | 61 | |
| GSE54994 | RTP3 | 83597 | 0 | 36 | 17 | |
| GSE60625 | RTP3 | 83597 | 5 | 0 | 6 | |
| GSE74703 | RTP3 | 83597 | 0 | 15 | 21 | |
| GSE74704 | RTP3 | 83597 | 0 | 12 | 8 | |
| TCGA | RTP3 | 83597 | 1 | 75 | 20 |
Total number of gains: 17; Total number of losses: 235; Total Number of normals: 236.
Somatic mutations of RTP3:
Generating mutation plots.
Highly correlated genes for RTP3:
Showing top 20/64 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RTP3 | NCR2 | 0.717921 | 3 | 0 | 3 |
| RTP3 | GALNTL5 | 0.679872 | 3 | 0 | 3 |
| RTP3 | ZFYVE28 | 0.6635 | 3 | 0 | 3 |
| RTP3 | KLK4 | 0.636057 | 4 | 0 | 3 |
| RTP3 | B4GALNT2 | 0.634893 | 3 | 0 | 3 |
| RTP3 | LZTS1 | 0.633671 | 3 | 0 | 3 |
| RTP3 | RNF31 | 0.632836 | 3 | 0 | 3 |
| RTP3 | CCDC88B | 0.618779 | 3 | 0 | 3 |
| RTP3 | NXF5 | 0.614023 | 3 | 0 | 3 |
| RTP3 | TBC1D10C | 0.58976 | 3 | 0 | 3 |
| RTP3 | CA7 | 0.587752 | 4 | 0 | 3 |
| RTP3 | LGALS9 | 0.585965 | 4 | 0 | 3 |
| RTP3 | TERT | 0.58555 | 4 | 0 | 3 |
| RTP3 | CD300LG | 0.585469 | 3 | 0 | 3 |
| RTP3 | LINC00557 | 0.581416 | 3 | 0 | 3 |
| RTP3 | C11orf21 | 0.577898 | 5 | 0 | 4 |
| RTP3 | C14orf180 | 0.576623 | 3 | 0 | 3 |
| RTP3 | CDHR2 | 0.574125 | 4 | 0 | 3 |
| RTP3 | PDZK1IP1 | 0.572747 | 4 | 0 | 3 |
| RTP3 | KIF12 | 0.572681 | 4 | 0 | 3 |
For details and further investigation, click here
