| Full name: coiled-coil domain containing 13 | Alias Symbol: FLJ25467 | ||
| Type: protein-coding gene | Cytoband: 3p22.1 | ||
| Entrez ID: 152206 | HGNC ID: HGNC:26358 | Ensembl Gene: ENSG00000244607 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CCDC13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCDC13 | 152206 | 1553397_at | -0.2489 | 0.2757 | |
| GSE26886 | CCDC13 | 152206 | 1553397_at | -0.2397 | 0.0966 | |
| GSE45670 | CCDC13 | 152206 | 1553397_at | 0.0601 | 0.5376 | |
| GSE53622 | CCDC13 | 152206 | 86937 | -0.7585 | 0.0000 | |
| GSE53624 | CCDC13 | 152206 | 86937 | -0.9735 | 0.0000 | |
| GSE63941 | CCDC13 | 152206 | 1553397_at | 0.1706 | 0.2192 | |
| GSE77861 | CCDC13 | 152206 | 1553397_at | -0.1018 | 0.3360 | |
| SRP133303 | CCDC13 | 152206 | RNAseq | -0.6145 | 0.0366 | |
| SRP159526 | CCDC13 | 152206 | RNAseq | -1.3193 | 0.0188 | |
| SRP219564 | CCDC13 | 152206 | RNAseq | -1.1679 | 0.0351 | |
| TCGA | CCDC13 | 152206 | RNAseq | -1.0626 | 0.0028 |
Upregulated datasets: 0; Downregulated datasets: 3.
Survival by CCDC13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CCDC13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCDC13 | 152206 | 0 | 19 | 11 | |
| GSE20123 | CCDC13 | 152206 | 0 | 19 | 11 | |
| GSE43470 | CCDC13 | 152206 | 0 | 21 | 22 | |
| GSE46452 | CCDC13 | 152206 | 2 | 17 | 40 | |
| GSE47630 | CCDC13 | 152206 | 1 | 24 | 15 | |
| GSE54993 | CCDC13 | 152206 | 7 | 2 | 61 | |
| GSE54994 | CCDC13 | 152206 | 1 | 34 | 18 | |
| GSE60625 | CCDC13 | 152206 | 5 | 0 | 6 | |
| GSE74703 | CCDC13 | 152206 | 0 | 17 | 19 | |
| GSE74704 | CCDC13 | 152206 | 0 | 13 | 7 | |
| TCGA | CCDC13 | 152206 | 1 | 71 | 24 |
Total number of gains: 17; Total number of losses: 237; Total Number of normals: 234.
Somatic mutations of CCDC13:
Generating mutation plots.
Highly correlated genes for CCDC13:
Showing top 20/277 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCDC13 | PRSS58 | 0.710185 | 3 | 0 | 3 |
| CCDC13 | G6PC2 | 0.704514 | 4 | 0 | 4 |
| CCDC13 | SPATA31E1 | 0.679523 | 5 | 0 | 4 |
| CCDC13 | FATE1 | 0.663266 | 3 | 0 | 3 |
| CCDC13 | ALLC | 0.660497 | 3 | 0 | 3 |
| CCDC13 | DNAI1 | 0.657516 | 4 | 0 | 3 |
| CCDC13 | ZNF619 | 0.656716 | 3 | 0 | 3 |
| CCDC13 | PRSS33 | 0.655928 | 5 | 0 | 4 |
| CCDC13 | MRGPRG-AS1 | 0.654297 | 4 | 0 | 4 |
| CCDC13 | IQCJ-SCHIP1-AS1 | 0.650587 | 4 | 0 | 3 |
| CCDC13 | SLC4A9 | 0.650271 | 4 | 0 | 4 |
| CCDC13 | PKD2L1 | 0.648165 | 5 | 0 | 4 |
| CCDC13 | STPG2 | 0.645276 | 3 | 0 | 3 |
| CCDC13 | CYP4A11 | 0.641568 | 3 | 0 | 3 |
| CCDC13 | ASB16 | 0.639248 | 3 | 0 | 3 |
| CCDC13 | LINC01343 | 0.638535 | 4 | 0 | 3 |
| CCDC13 | DEFB118 | 0.636428 | 4 | 0 | 4 |
| CCDC13 | MIR4755 | 0.635165 | 5 | 0 | 4 |
| CCDC13 | CACNG6 | 0.632996 | 5 | 0 | 4 |
| CCDC13 | OR51B2 | 0.632835 | 3 | 0 | 3 |
For details and further investigation, click here
