CNTNAP3B

 

Full name: contactin associated protein like 3B Alias Symbol: 
Type: protein-coding gene Cytoband: 9p11.2
Entrez ID: 728577 HGNC ID: HGNC:32035 Ensembl Gene: ENSG00000154529 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of CNTNAP3B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 CNTNAP3B 728577 157922 -1.2811 0.0000
GSE53624 CNTNAP3B 728577 124839 -1.0641 0.0000
GSE97050 CNTNAP3B 728577 A_33_P3281667 -0.7370 0.1465
SRP007169 CNTNAP3B 728577 RNAseq 0.7061 0.2534
SRP133303 CNTNAP3B 728577 RNAseq -1.5051 0.0117
SRP159526 CNTNAP3B 728577 RNAseq -1.0068 0.1205
SRP219564 CNTNAP3B 728577 RNAseq -0.3404 0.6752

Upregulated datasets: 0; Downregulated datasets: 3.  

 

Survival by CNTNAP3B expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of CNTNAP3B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CNTNAP3B 728577 4 13 13
GSE20123 CNTNAP3B 728577 4 13 13
GSE43470 CNTNAP3B 728577 1 8 34
GSE46452 CNTNAP3B 728577 6 16 37
GSE47630 CNTNAP3B 728577 1 20 19
GSE54993 CNTNAP3B 728577 6 0 64
GSE54994 CNTNAP3B 728577 4 15 34
GSE60625 CNTNAP3B 728577 0 0 11
GSE74703 CNTNAP3B 728577 1 6 29
GSE74704 CNTNAP3B 728577 1 10 9
TCGA CNTNAP3B 728577 22 42 32

Total number of gains: 50; Total number of losses: 143; Total Number of normals: 295.  

 

Somatic mutations of CNTNAP3B:

 

Generating mutation plots.

 

Highly correlated genes for CNTNAP3B:

 

Showing all 9 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CNTNAP3BCNTNAP30.827096303
CNTNAP3BVMAC0.696805303
CNTNAP3BSECISBP2L0.682695303
CNTNAP3BSOX170.675504303
CNTNAP3BCNST0.655188303
CNTNAP3BCAMK2N10.622384303
CNTNAP3BARHGAP100.618514303
CNTNAP3BCNKSR30.617796303
CNTNAP3BAFF40.606017303

For details and further investigation, click here