| Full name: contactin associated protein like 3 | Alias Symbol: CASPR3|KIAA1714|FLJ14195|CNTNAP3A | ||
| Type: protein-coding gene | Cytoband: 9p12 | ||
| Entrez ID: 79937 | HGNC ID: HGNC:13834 | Ensembl Gene: ENSG00000106714 | OMIM ID: 610517 |
| Drug and gene relationship at DGIdb | |||
Expression of CNTNAP3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CNTNAP3 | 79937 | 233202_at | -1.0005 | 0.0445 | |
| GSE26886 | CNTNAP3 | 79937 | 233202_at | 0.1231 | 0.4364 | |
| GSE45670 | CNTNAP3 | 79937 | 233202_at | -1.7204 | 0.0001 | |
| GSE53622 | CNTNAP3 | 79937 | 57998 | -1.1272 | 0.0000 | |
| GSE53624 | CNTNAP3 | 79937 | 57998 | -0.6080 | 0.0000 | |
| GSE63941 | CNTNAP3 | 79937 | 233202_at | 0.4630 | 0.0717 | |
| GSE77861 | CNTNAP3 | 79937 | 233202_at | -0.0109 | 0.9226 | |
| GSE97050 | CNTNAP3 | A_21_P0013630 | -0.0522 | 0.8689 | ||
| SRP007169 | CNTNAP3 | 79937 | RNAseq | 0.1084 | 0.8190 | |
| SRP008496 | CNTNAP3 | 79937 | RNAseq | 0.9013 | 0.0568 | |
| SRP064894 | CNTNAP3 | 79937 | RNAseq | -0.9033 | 0.0134 | |
| SRP133303 | CNTNAP3 | 79937 | RNAseq | -1.5050 | 0.0000 | |
| SRP159526 | CNTNAP3 | 79937 | RNAseq | -1.2916 | 0.0000 | |
| SRP193095 | CNTNAP3 | 79937 | RNAseq | -0.5917 | 0.0986 | |
| SRP219564 | CNTNAP3 | 79937 | RNAseq | 0.1240 | 0.8734 | |
| TCGA | CNTNAP3 | 79937 | RNAseq | -0.1261 | 0.5560 |
Upregulated datasets: 0; Downregulated datasets: 5.
Survival by CNTNAP3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CNTNAP3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CNTNAP3 | 79937 | 4 | 13 | 13 | |
| GSE20123 | CNTNAP3 | 79937 | 4 | 13 | 13 | |
| GSE43470 | CNTNAP3 | 79937 | 1 | 11 | 31 | |
| GSE46452 | CNTNAP3 | 79937 | 6 | 16 | 37 | |
| GSE47630 | CNTNAP3 | 79937 | 1 | 20 | 19 | |
| GSE54993 | CNTNAP3 | 79937 | 6 | 0 | 64 | |
| GSE54994 | CNTNAP3 | 79937 | 4 | 15 | 34 | |
| GSE60625 | CNTNAP3 | 79937 | 0 | 0 | 11 | |
| GSE74703 | CNTNAP3 | 79937 | 1 | 8 | 27 | |
| GSE74704 | CNTNAP3 | 79937 | 1 | 10 | 9 | |
| TCGA | CNTNAP3 | 79937 | 22 | 42 | 32 |
Total number of gains: 50; Total number of losses: 148; Total Number of normals: 290.
Somatic mutations of CNTNAP3:
Generating mutation plots.
Highly correlated genes for CNTNAP3:
Showing top 20/284 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CNTNAP3 | CNTNAP3B | 0.827096 | 3 | 0 | 3 |
| CNTNAP3 | CLCC1 | 0.822094 | 3 | 0 | 3 |
| CNTNAP3 | CDADC1 | 0.761715 | 3 | 0 | 3 |
| CNTNAP3 | ELL3 | 0.751184 | 3 | 0 | 3 |
| CNTNAP3 | SLC30A9 | 0.750324 | 3 | 0 | 3 |
| CNTNAP3 | BEX4 | 0.747367 | 4 | 0 | 4 |
| CNTNAP3 | MKRN2 | 0.736139 | 3 | 0 | 3 |
| CNTNAP3 | CRBN | 0.721914 | 3 | 0 | 3 |
| CNTNAP3 | ALG9 | 0.719074 | 3 | 0 | 3 |
| CNTNAP3 | NFIB | 0.712424 | 3 | 0 | 3 |
| CNTNAP3 | ESYT2 | 0.705922 | 3 | 0 | 3 |
| CNTNAP3 | PFDN5 | 0.702384 | 4 | 0 | 3 |
| CNTNAP3 | RPL14 | 0.702065 | 3 | 0 | 3 |
| CNTNAP3 | APPL1 | 0.701373 | 3 | 0 | 3 |
| CNTNAP3 | USP16 | 0.699904 | 4 | 0 | 4 |
| CNTNAP3 | FBXL5 | 0.69662 | 4 | 0 | 4 |
| CNTNAP3 | CCDC66 | 0.695417 | 3 | 0 | 3 |
| CNTNAP3 | PGM1 | 0.691596 | 3 | 0 | 3 |
| CNTNAP3 | PAN3 | 0.690314 | 3 | 0 | 3 |
| CNTNAP3 | FEM1C | 0.68955 | 3 | 0 | 3 |
For details and further investigation, click here
