CNTNAP5

 

Full name: contactin associated protein like 5 Alias Symbol: caspr5|FLJ31966
Type: protein-coding gene Cytoband: 2q14.3
Entrez ID: 129684 HGNC ID: HGNC:18748 Ensembl Gene: ENSG00000155052 OMIM ID: 610519
Drug and gene relationship at DGIdb

 

Expression of CNTNAP5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CNTNAP5 129684 1553418_a_at 0.2150 0.2991
GSE26886 CNTNAP5 129684 1553418_a_at 0.0921 0.3833
GSE45670 CNTNAP5 129684 1553418_a_at 0.0382 0.7430
GSE53622 CNTNAP5 129684 1511 0.6425 0.0160
GSE53624 CNTNAP5 129684 1511 0.7798 0.0000
GSE63941 CNTNAP5 129684 1553418_a_at 0.0092 0.9624
GSE77861 CNTNAP5 129684 1553418_a_at -0.1500 0.0481
SRP133303 CNTNAP5 129684 RNAseq 0.4045 0.0809
TCGA CNTNAP5 129684 RNAseq 0.0837 0.9458

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by CNTNAP5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CNTNAP5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CNTNAP5 129684 3 4 23
GSE20123 CNTNAP5 129684 3 4 23
GSE43470 CNTNAP5 129684 4 1 38
GSE46452 CNTNAP5 129684 1 3 55
GSE47630 CNTNAP5 129684 6 0 34
GSE54993 CNTNAP5 129684 0 6 64
GSE54994 CNTNAP5 129684 11 0 42
GSE60625 CNTNAP5 129684 0 3 8
GSE74703 CNTNAP5 129684 3 1 32
GSE74704 CNTNAP5 129684 2 2 16
TCGA CNTNAP5 129684 25 10 61

Total number of gains: 58; Total number of losses: 34; Total Number of normals: 396.  

 

Somatic mutations of CNTNAP5:

 

Generating mutation plots.

 

Highly correlated genes for CNTNAP5:

 

Showing all 11 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CNTNAP5CHRNA90.667817303
CNTNAP5TNNI10.63106303
CNTNAP5BPIFA20.593337303
CNTNAP5GTSF10.589989303
CNTNAP5SIX60.565179303
CNTNAP5C9orf1310.563374303
CNTNAP5CUX20.562654303
CNTNAP5SAGE10.547195303
CNTNAP5NR6A10.546858303
CNTNAP5ADRA1D0.543573303
CNTNAP5AP4S10.536675403

For details and further investigation, click here