| Full name: copine family member 9 | Alias Symbol: KIAA4217 | ||
| Type: protein-coding gene | Cytoband: 3p25.3 | ||
| Entrez ID: 151835 | HGNC ID: HGNC:24336 | Ensembl Gene: ENSG00000144550 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CPNE9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CPNE9 | 151835 | 239139_at | 0.1134 | 0.6425 | |
| GSE26886 | CPNE9 | 151835 | 239139_at | 0.0950 | 0.4602 | |
| GSE45670 | CPNE9 | 151835 | 239139_at | 0.0676 | 0.5090 | |
| GSE53622 | CPNE9 | 151835 | 80972 | -0.0061 | 0.9348 | |
| GSE53624 | CPNE9 | 151835 | 80972 | 0.0903 | 0.2600 | |
| GSE63941 | CPNE9 | 151835 | 239139_at | 0.3485 | 0.0270 | |
| GSE77861 | CPNE9 | 151835 | 239139_at | -0.0572 | 0.7094 | |
| GSE97050 | CPNE9 | 151835 | A_23_P57829 | -0.1224 | 0.6097 | |
| TCGA | CPNE9 | 151835 | RNAseq | -1.3024 | 0.1366 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CPNE9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CPNE9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CPNE9 | 151835 | 1 | 18 | 11 | |
| GSE20123 | CPNE9 | 151835 | 1 | 18 | 11 | |
| GSE43470 | CPNE9 | 151835 | 1 | 20 | 22 | |
| GSE46452 | CPNE9 | 151835 | 2 | 17 | 40 | |
| GSE47630 | CPNE9 | 151835 | 3 | 22 | 15 | |
| GSE54993 | CPNE9 | 151835 | 6 | 1 | 63 | |
| GSE54994 | CPNE9 | 151835 | 3 | 31 | 19 | |
| GSE60625 | CPNE9 | 151835 | 5 | 0 | 6 | |
| GSE74703 | CPNE9 | 151835 | 1 | 16 | 19 | |
| GSE74704 | CPNE9 | 151835 | 1 | 11 | 8 | |
| TCGA | CPNE9 | 151835 | 5 | 65 | 26 |
Total number of gains: 29; Total number of losses: 219; Total Number of normals: 240.
Somatic mutations of CPNE9:
Generating mutation plots.
Highly correlated genes for CPNE9:
Showing top 20/279 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CPNE9 | LYZL2 | 0.814726 | 3 | 0 | 3 |
| CPNE9 | OTOG | 0.798523 | 3 | 0 | 3 |
| CPNE9 | OR7G2 | 0.798215 | 3 | 0 | 3 |
| CPNE9 | OR2B11 | 0.793868 | 3 | 0 | 3 |
| CPNE9 | OR4C6 | 0.785487 | 3 | 0 | 3 |
| CPNE9 | ZNF182 | 0.782141 | 4 | 0 | 4 |
| CPNE9 | ZAR1L | 0.770913 | 3 | 0 | 3 |
| CPNE9 | CNGB1 | 0.768715 | 3 | 0 | 3 |
| CPNE9 | DYTN | 0.765565 | 3 | 0 | 3 |
| CPNE9 | OR2D2 | 0.765461 | 3 | 0 | 3 |
| CPNE9 | NAT8B | 0.761083 | 3 | 0 | 3 |
| CPNE9 | OR2G2 | 0.759931 | 3 | 0 | 3 |
| CPNE9 | PRSS38 | 0.757894 | 3 | 0 | 3 |
| CPNE9 | SPACA5 | 0.757138 | 3 | 0 | 3 |
| CPNE9 | TTC21A | 0.753905 | 3 | 0 | 3 |
| CPNE9 | GCM2 | 0.745295 | 3 | 0 | 3 |
| CPNE9 | F2 | 0.744464 | 3 | 0 | 3 |
| CPNE9 | OR4A15 | 0.742702 | 3 | 0 | 3 |
| CPNE9 | RAG2 | 0.742434 | 3 | 0 | 3 |
| CPNE9 | NPY2R | 0.742022 | 3 | 0 | 3 |
For details and further investigation, click here
