DSCR8

 

Full name: Down syndrome critical region 8 Alias Symbol: MTAG2|CT25.1a|CT25.1b|MMA-1a|MMA-1b
Type: non-coding RNA Cytoband: 21q22.13
Entrez ID: 84677 HGNC ID: HGNC:16707 Ensembl Gene: ENSG00000198054 OMIM ID: 613396
Drug and gene relationship at DGIdb

 

Expression of DSCR8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DSCR8 84677 241224_x_at 0.3258 0.6173
GSE26886 DSCR8 84677 241224_x_at -0.1925 0.0694
GSE45670 DSCR8 84677 241224_x_at 0.2740 0.4051
GSE53622 DSCR8 84677 68761 1.1831 0.0046
GSE53624 DSCR8 84677 68761 1.2016 0.0000
GSE63941 DSCR8 84677 241224_x_at -0.0079 0.9950
GSE77861 DSCR8 84677 241224_x_at -0.0901 0.3441
TCGA DSCR8 84677 RNAseq 3.4519 0.1776

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by DSCR8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DSCR8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DSCR8 84677 2 9 19
GSE20123 DSCR8 84677 2 10 18
GSE43470 DSCR8 84677 1 11 31
GSE46452 DSCR8 84677 1 21 37
GSE47630 DSCR8 84677 6 17 17
GSE54993 DSCR8 84677 8 1 61
GSE54994 DSCR8 84677 3 9 41
GSE60625 DSCR8 84677 0 0 11
GSE74703 DSCR8 84677 1 8 27
GSE74704 DSCR8 84677 1 7 12
TCGA DSCR8 84677 8 41 47

Total number of gains: 33; Total number of losses: 134; Total Number of normals: 321.  


 

Somatic mutations of DSCR8:

 

Generating mutation plots.

 

Highly correlated genes for DSCR8:

 

Showing all 17 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DSCR8WNK20.697724303
DSCR8LINC014100.643778303
DSCR8VGLL10.639709303
DSCR8TCP110.62965303
DSCR8LINC011970.617925303
DSCR8TNNT30.610474303
DSCR8LGALS140.608425303
DSCR8LY6G5C0.607981403
DSCR8KRTAP19-30.601587303
DSCR8GYPB0.600398303
DSCR8RHOH0.599769403
DSCR8ZDHHC190.586977303
DSCR8SUN50.571112303
DSCR8NRSN10.566907303
DSCR8LINC008790.518873303
DSCR8DEFB1270.511154403
DSCR8LDHAL6A0.505483403

For details and further investigation, click here