| Full name: FAM155A intronic transcript 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q33.3 | ||
| Entrez ID: 100874375 | HGNC ID: HGNC:41503 | Ensembl Gene: ENSG00000227248 | OMIM ID: |
Expression of FAM155A-IT1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FAM155A-IT1 | 100874375 | 1562696_at | 0.1475 | 0.5945 | |
| GSE26886 | FAM155A-IT1 | 100874375 | 1562696_at | 0.0236 | 0.8221 | |
| GSE45670 | FAM155A-IT1 | 100874375 | 1562696_at | 0.1168 | 0.0398 | |
| GSE63941 | FAM155A-IT1 | 100874375 | 1562696_at | -0.6339 | 0.0003 | |
| GSE77861 | FAM155A-IT1 | 100874375 | 1562696_at | -0.0492 | 0.4932 | |
| SRP133303 | FAM155A-IT1 | 100874375 | RNAseq | -0.6404 | 0.1002 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of FAM155A-IT1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FAM155A-IT1 | 100874375 | 6 | 11 | 13 | |
| GSE20123 | FAM155A-IT1 | 100874375 | 6 | 10 | 14 | |
| GSE43470 | FAM155A-IT1 | 100874375 | 3 | 11 | 29 | |
| GSE46452 | FAM155A-IT1 | 100874375 | 1 | 31 | 27 | |
| GSE47630 | FAM155A-IT1 | 100874375 | 3 | 26 | 11 | |
| GSE54993 | FAM155A-IT1 | 100874375 | 11 | 4 | 55 | |
| GSE54994 | FAM155A-IT1 | 100874375 | 8 | 9 | 36 | |
| GSE60625 | FAM155A-IT1 | 100874375 | 0 | 3 | 8 | |
| GSE74703 | FAM155A-IT1 | 100874375 | 2 | 9 | 25 | |
| GSE74704 | FAM155A-IT1 | 100874375 | 4 | 10 | 6 |
Total number of gains: 44; Total number of losses: 124; Total Number of normals: 224.
Somatic mutations of FAM155A-IT1:
Generating mutation plots.
Highly correlated genes for FAM155A-IT1:
Showing all 11 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FAM155A-IT1 | ANO3 | 0.671974 | 3 | 0 | 3 |
| FAM155A-IT1 | DKK2 | 0.656254 | 3 | 0 | 3 |
| FAM155A-IT1 | CEP89 | 0.617578 | 3 | 0 | 3 |
| FAM155A-IT1 | SUFU | 0.609183 | 3 | 0 | 3 |
| FAM155A-IT1 | STS | 0.595555 | 3 | 0 | 3 |
| FAM155A-IT1 | NECAP2 | 0.585011 | 3 | 0 | 3 |
| FAM155A-IT1 | SEC31A | 0.582573 | 3 | 0 | 3 |
| FAM155A-IT1 | CEP57L1 | 0.578807 | 3 | 0 | 3 |
| FAM155A-IT1 | MCHR1 | 0.575908 | 4 | 0 | 3 |
| FAM155A-IT1 | UBTD1 | 0.570169 | 3 | 0 | 3 |
| FAM155A-IT1 | BRF2 | 0.565734 | 3 | 0 | 3 |
For details and further investigation, click here
