| Full name: long intergenic non-protein coding RNA 877 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3p13 | ||
| Entrez ID: 285286 | HGNC ID: HGNC:27706 | Ensembl Gene: ENSG00000241163 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00877:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00877 | 285286 | 243954_at | -0.1170 | 0.6044 | |
| GSE26886 | LINC00877 | 285286 | 243954_at | -0.1644 | 0.1645 | |
| GSE45670 | LINC00877 | 285286 | 243954_at | 0.0234 | 0.8304 | |
| GSE53622 | LINC00877 | 285286 | 70819 | -0.1136 | 0.6566 | |
| GSE53624 | LINC00877 | 285286 | 10245 | -0.1101 | 0.4918 | |
| GSE63941 | LINC00877 | 285286 | 243954_at | -0.2094 | 0.1224 | |
| GSE77861 | LINC00877 | 285286 | 243954_at | -0.1315 | 0.2946 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00877 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00877:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00877 | 285286 | 1 | 20 | 9 | |
| GSE20123 | LINC00877 | 285286 | 1 | 20 | 9 | |
| GSE43470 | LINC00877 | 285286 | 0 | 21 | 22 | |
| GSE46452 | LINC00877 | 285286 | 2 | 17 | 40 | |
| GSE47630 | LINC00877 | 285286 | 1 | 23 | 16 | |
| GSE54993 | LINC00877 | 285286 | 4 | 3 | 63 | |
| GSE54994 | LINC00877 | 285286 | 1 | 31 | 21 | |
| GSE60625 | LINC00877 | 285286 | 3 | 1 | 7 | |
| GSE74703 | LINC00877 | 285286 | 0 | 17 | 19 | |
| GSE74704 | LINC00877 | 285286 | 1 | 13 | 6 | |
| TCGA | LINC00877 | 285286 | 1 | 79 | 16 |
Total number of gains: 15; Total number of losses: 245; Total Number of normals: 228.
Somatic mutations of LINC00877:
Generating mutation plots.
Highly correlated genes for LINC00877:
Showing all 16 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00877 | CNDP1 | 0.637786 | 3 | 0 | 3 |
| LINC00877 | ARL5C | 0.61998 | 4 | 0 | 4 |
| LINC00877 | WDR87 | 0.61313 | 4 | 0 | 3 |
| LINC00877 | DSCR10 | 0.604855 | 4 | 0 | 3 |
| LINC00877 | SLC26A8 | 0.603276 | 3 | 0 | 3 |
| LINC00877 | GNA14 | 0.601426 | 4 | 0 | 3 |
| LINC00877 | PENK | 0.566817 | 3 | 0 | 3 |
| LINC00877 | THPO | 0.55662 | 4 | 0 | 3 |
| LINC00877 | ZNF843 | 0.554049 | 4 | 0 | 3 |
| LINC00877 | PKD1L2 | 0.548346 | 3 | 0 | 3 |
| LINC00877 | LRRTM2 | 0.546701 | 3 | 0 | 3 |
| LINC00877 | CRHR2 | 0.541025 | 4 | 0 | 3 |
| LINC00877 | LINC01300 | 0.539808 | 4 | 0 | 3 |
| LINC00877 | TAF1L | 0.538776 | 4 | 0 | 3 |
| LINC00877 | LINC00924 | 0.53509 | 4 | 0 | 3 |
| LINC00877 | OR4D2 | 0.53449 | 3 | 0 | 3 |
For details and further investigation, click here
