| Full name: long intergenic non-protein coding RNA 944 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 12q24.32 | ||
| Entrez ID: 387895 | HGNC ID: HGNC:48640 | Ensembl Gene: ENSG00000256128 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00944:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00944 | 387895 | 1560818_at | 0.0471 | 0.9385 | |
| GSE26886 | LINC00944 | 387895 | 1560818_at | -0.0477 | 0.7745 | |
| GSE45670 | LINC00944 | 387895 | 1560818_at | 0.0988 | 0.3735 | |
| GSE53622 | LINC00944 | 387895 | 71124 | 1.2626 | 0.0000 | |
| GSE53624 | LINC00944 | 387895 | 71124 | 1.4564 | 0.0000 | |
| GSE63941 | LINC00944 | 387895 | 1560818_at | 0.2903 | 0.0360 | |
| GSE77861 | LINC00944 | 387895 | 1560818_at | -0.0441 | 0.7512 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by LINC00944 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00944:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00944 | 387895 | 3 | 4 | 23 | |
| GSE20123 | LINC00944 | 387895 | 3 | 4 | 23 | |
| GSE43470 | LINC00944 | 387895 | 3 | 0 | 40 | |
| GSE46452 | LINC00944 | 387895 | 9 | 1 | 49 | |
| GSE47630 | LINC00944 | 387895 | 9 | 3 | 28 | |
| GSE54993 | LINC00944 | 387895 | 0 | 5 | 65 | |
| GSE54994 | LINC00944 | 387895 | 4 | 8 | 41 | |
| GSE60625 | LINC00944 | 387895 | 0 | 0 | 11 | |
| GSE74703 | LINC00944 | 387895 | 3 | 0 | 33 | |
| GSE74704 | LINC00944 | 387895 | 2 | 3 | 15 | |
| TCGA | LINC00944 | 387895 | 21 | 11 | 64 |
Total number of gains: 57; Total number of losses: 39; Total Number of normals: 392.
Somatic mutations of LINC00944:
Generating mutation plots.
Highly correlated genes for LINC00944:
Showing top 20/46 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00944 | VWA3A | 0.72715 | 3 | 0 | 3 |
| LINC00944 | C1orf194 | 0.688897 | 3 | 0 | 3 |
| LINC00944 | POM121L12 | 0.676236 | 3 | 0 | 3 |
| LINC00944 | LINC01049 | 0.656577 | 3 | 0 | 3 |
| LINC00944 | TINAG | 0.654218 | 3 | 0 | 3 |
| LINC00944 | SPATA24 | 0.64905 | 4 | 0 | 3 |
| LINC00944 | SETD5 | 0.647307 | 3 | 0 | 3 |
| LINC00944 | GPR52 | 0.632647 | 4 | 0 | 4 |
| LINC00944 | SLAMF6 | 0.630477 | 5 | 0 | 5 |
| LINC00944 | OPRK1 | 0.623845 | 3 | 0 | 3 |
| LINC00944 | MIR4313 | 0.620628 | 3 | 0 | 3 |
| LINC00944 | ABCA4 | 0.619893 | 3 | 0 | 3 |
| LINC00944 | ADPRH | 0.61848 | 3 | 0 | 3 |
| LINC00944 | CCM2L | 0.611865 | 3 | 0 | 3 |
| LINC00944 | LINC00491 | 0.603629 | 3 | 0 | 3 |
| LINC00944 | WFDC9 | 0.603193 | 3 | 0 | 3 |
| LINC00944 | GABRB2 | 0.599059 | 3 | 0 | 3 |
| LINC00944 | SLC25A35 | 0.598126 | 4 | 0 | 4 |
| LINC00944 | KLHL30-AS1 | 0.592272 | 4 | 0 | 3 |
| LINC00944 | TSACC | 0.589606 | 3 | 0 | 3 |
For details and further investigation, click here
