| Full name: long intergenic non-protein coding RNA 491 | Alias Symbol: BC008363 | ||
| Type: non-coding RNA | Cytoband: 5q21.1 | ||
| Entrez ID: 285708 | HGNC ID: HGNC:43428 | Ensembl Gene: ENSG00000250682 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00491:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00491 | 285708 | 1564281_at | 0.0307 | 0.9268 | |
| GSE26886 | LINC00491 | 285708 | 1564281_at | 0.1863 | 0.2500 | |
| GSE45670 | LINC00491 | 285708 | 1564281_at | 0.1026 | 0.5266 | |
| GSE63941 | LINC00491 | 285708 | 1564281_at | 0.7094 | 0.0271 | |
| GSE77861 | LINC00491 | 285708 | 1564281_at | -0.3125 | 0.0635 | |
| SRP007169 | LINC00491 | 285708 | RNAseq | 2.8277 | 0.0002 | |
| SRP133303 | LINC00491 | 285708 | RNAseq | 2.6586 | 0.0000 | |
| SRP159526 | LINC00491 | 285708 | RNAseq | 2.5735 | 0.0000 |
Upregulated datasets: 3; Downregulated datasets: 0.
Copy number change of LINC00491:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00491 | 285708 | 1 | 13 | 16 | |
| GSE20123 | LINC00491 | 285708 | 1 | 13 | 16 | |
| GSE43470 | LINC00491 | 285708 | 3 | 9 | 31 | |
| GSE46452 | LINC00491 | 285708 | 0 | 28 | 31 | |
| GSE47630 | LINC00491 | 285708 | 0 | 20 | 20 | |
| GSE54993 | LINC00491 | 285708 | 8 | 1 | 61 | |
| GSE54994 | LINC00491 | 285708 | 1 | 17 | 35 | |
| GSE60625 | LINC00491 | 285708 | 0 | 0 | 11 | |
| GSE74703 | LINC00491 | 285708 | 2 | 7 | 27 | |
| GSE74704 | LINC00491 | 285708 | 1 | 7 | 12 | |
| TCGA | LINC00491 | 285708 | 3 | 43 | 50 |
Total number of gains: 20; Total number of losses: 158; Total Number of normals: 310.
Somatic mutations of LINC00491:
Generating mutation plots.
Highly correlated genes for LINC00491:
Showing top 20/32 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00491 | LKAAEAR1 | 0.65544 | 3 | 0 | 3 |
| LINC00491 | TMEM72 | 0.631742 | 3 | 0 | 3 |
| LINC00491 | RLBP1 | 0.628832 | 3 | 0 | 3 |
| LINC00491 | VWA3A | 0.627108 | 3 | 0 | 3 |
| LINC00491 | C19orf84 | 0.623757 | 5 | 0 | 4 |
| LINC00491 | LINC00216 | 0.623231 | 3 | 0 | 3 |
| LINC00491 | TAL2 | 0.620687 | 3 | 0 | 3 |
| LINC00491 | LINC01115 | 0.611831 | 4 | 0 | 3 |
| LINC00491 | OTC | 0.610541 | 3 | 0 | 3 |
| LINC00491 | KCNE2 | 0.610103 | 3 | 0 | 3 |
| LINC00491 | LINC00944 | 0.603629 | 3 | 0 | 3 |
| LINC00491 | SPEM1 | 0.594324 | 3 | 0 | 3 |
| LINC00491 | VPS9D1-AS1 | 0.593396 | 4 | 0 | 3 |
| LINC00491 | KRTAP13-1 | 0.583633 | 4 | 0 | 3 |
| LINC00491 | SLC8A3 | 0.57618 | 3 | 0 | 3 |
| LINC00491 | PNPLA2 | 0.573372 | 3 | 0 | 3 |
| LINC00491 | RHO | 0.571504 | 4 | 0 | 4 |
| LINC00491 | SAMD15 | 0.567254 | 4 | 0 | 3 |
| LINC00491 | SLC17A4 | 0.565766 | 4 | 0 | 3 |
| LINC00491 | MAP3K10 | 0.562178 | 3 | 0 | 3 |
For details and further investigation, click here
