UIMC1

 

Full name: ubiquitin interaction motif containing 1 Alias Symbol: RAP80
Type: protein-coding gene Cytoband: 5q35.2
Entrez ID: 51720 HGNC ID: HGNC:30298 Ensembl Gene: ENSG00000087206 OMIM ID: 609433
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of UIMC1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 UIMC1 51720 220746_s_at -0.3463 0.3522
GSE20347 UIMC1 51720 220746_s_at 0.0920 0.5219
GSE23400 UIMC1 51720 220746_s_at -0.0281 0.7039
GSE26886 UIMC1 51720 220746_s_at 0.2524 0.2773
GSE29001 UIMC1 51720 220746_s_at -0.1883 0.5251
GSE38129 UIMC1 51720 220746_s_at -0.0403 0.7667
GSE45670 UIMC1 51720 220746_s_at -0.3209 0.0770
GSE53622 UIMC1 51720 15479 -0.4066 0.0000
GSE53624 UIMC1 51720 15479 -0.3514 0.0000
GSE63941 UIMC1 51720 220746_s_at -0.2062 0.6245
GSE77861 UIMC1 51720 220746_s_at -0.0027 0.9963
GSE97050 UIMC1 51720 A_23_P317691 -0.2738 0.2713
SRP007169 UIMC1 51720 RNAseq -0.1383 0.7464
SRP008496 UIMC1 51720 RNAseq -0.2229 0.4156
SRP064894 UIMC1 51720 RNAseq 0.1494 0.2033
SRP133303 UIMC1 51720 RNAseq 0.1418 0.2265
SRP159526 UIMC1 51720 RNAseq -0.0132 0.9659
SRP193095 UIMC1 51720 RNAseq 0.1415 0.1626
SRP219564 UIMC1 51720 RNAseq 0.1291 0.6783
TCGA UIMC1 51720 RNAseq 0.0135 0.8120

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by UIMC1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of UIMC1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 UIMC1 51720 2 13 15
GSE20123 UIMC1 51720 2 13 15
GSE43470 UIMC1 51720 1 11 31
GSE46452 UIMC1 51720 0 27 32
GSE47630 UIMC1 51720 0 20 20
GSE54993 UIMC1 51720 10 2 58
GSE54994 UIMC1 51720 2 17 34
GSE60625 UIMC1 51720 1 0 10
GSE74703 UIMC1 51720 1 7 28
GSE74704 UIMC1 51720 1 6 13
TCGA UIMC1 51720 7 35 54

Total number of gains: 27; Total number of losses: 151; Total Number of normals: 310.  


 

Somatic mutations of UIMC1:

 

Generating mutation plots.

 

Highly correlated genes for UIMC1:

 

Showing top 20/223 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
UIMC1KPNA30.759216303
UIMC1ZMAT10.754669303
UIMC1ZNF4490.743637303
UIMC1TOMM40L0.737193303
UIMC1KLHL30.705321303
UIMC1GALNT110.692567303
UIMC1CCDC970.687942303
UIMC1CITED20.687689303
UIMC1C20orf1940.686376303
UIMC1EPC20.682027403
UIMC1SCAPER0.679677303
UIMC1RSF10.677817303
UIMC1EFCAB70.673655303
UIMC1KIAA20260.663006303
UIMC1INPP5E0.662221303
UIMC1MRPL90.661872303
UIMC1CLYBL0.660875403
UIMC1FEM1C0.659088403
UIMC1CACNA2D20.659073403
UIMC1DNAJC270.658119403

For details and further investigation, click here